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  5. Aop_g21409

Aop_g21409 (emb1417)


Aliases : emb1417

Description : not classified & original description: none


Gene families : OG0001686 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001686_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g21409

Target Alias Description ECC score Gene Family Method Actions
Cba_g10004 emb1417 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g38403 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.16G020800.1 Ceric.16G020800 not classified & original description: pacid=50589623... 0.03 OrthoFinder output from all 47 species
Dac_g31123 emb1417 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g33827 emb1417 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g01369 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os01g55290.2 emb1417, LOC_Os01g55290 Pentatricopeptide repeat-containing protein At4g21190... 0.02 OrthoFinder output from all 47 species
LOC_Os07g36180.2 LOC_Os07g36180 Pentatricopeptide repeat-containing protein At4g18975,... 0.02 OrthoFinder output from all 47 species
Nbi_g09758 emb1417 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ore_g06884 emb1417 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g27530 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g07146 emb1417 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g18699 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0021.g008329 No alias not classified & original description: CDS=1-1188 0.02 OrthoFinder output from all 47 species
Sam_g09326 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g071570.4.1 Solyc02g071570 Pentatricopeptide repeat-containing protein At4g18975,... 0.03 OrthoFinder output from all 47 species
Spa_g12796 emb1417 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g32884 emb1417 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e019767_P001 emb1417, Zm00001e019767 Pentatricopeptide repeat-containing protein At4g21190... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003919 FMN adenylyltransferase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006066 alcohol metabolic process IEP HCCA
BP GO:0006766 vitamin metabolic process IEP HCCA
BP GO:0006767 water-soluble vitamin metabolic process IEP HCCA
BP GO:0006771 riboflavin metabolic process IEP HCCA
BP GO:0006772 thiamine metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0009110 vitamin biosynthetic process IEP HCCA
BP GO:0009228 thiamine biosynthetic process IEP HCCA
BP GO:0009231 riboflavin biosynthetic process IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0034308 primary alcohol metabolic process IEP HCCA
BP GO:0034309 primary alcohol biosynthetic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
BP GO:0042364 water-soluble vitamin biosynthetic process IEP HCCA
BP GO:0042723 thiamine-containing compound metabolic process IEP HCCA
BP GO:0042724 thiamine-containing compound biosynthetic process IEP HCCA
BP GO:0042726 flavin-containing compound metabolic process IEP HCCA
BP GO:0042727 flavin-containing compound biosynthetic process IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046165 alcohol biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
MF GO:0070566 adenylyltransferase activity IEP HCCA
MF GO:0070569 uridylyltransferase activity IEP HCCA
BP GO:0072527 pyrimidine-containing compound metabolic process IEP HCCA
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1901615 organic hydroxy compound metabolic process IEP HCCA
BP GO:1901617 organic hydroxy compound biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!