Aop_g21162


Description : not classified & original description: none


Gene families : OG0001264 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001264_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g21162

Target Alias Description ECC score Gene Family Method Actions
Aev_g14533 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g08540 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene36240.t1 Aspi01Gene36240 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g12924 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g21807 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.08G003300.1 Ceric.08G003300 not classified & original description: pacid=50638706... 0.06 OrthoFinder output from all 47 species
Ceric.1Z218900.1 Ceric.1Z218900 not classified & original description: pacid=50637330... 0.04 OrthoFinder output from all 47 species
Ceric.30G033300.1 Ceric.30G033300 not classified & original description: pacid=50608686... 0.02 OrthoFinder output from all 47 species
Ehy_g17567 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g02225 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g07402 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g01093 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g09695 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g09926 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g13218 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g46611 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0295.g027183 No alias not classified & original description: CDS=1-1983 0.03 OrthoFinder output from all 47 species
Spa_g07310 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g08270 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g08432 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g02050 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g09598 No alias PIP/PIPL precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0003980 UDP-glucose:glycoprotein glucosyltransferase activity IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 170 199
IPR002885 Pentatricopeptide_repeat 295 347
IPR002885 Pentatricopeptide_repeat 236 284
No external refs found!