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  5. Aop_g20677

Aop_g20677 (EXP15, ATEXPA15,...)


Aliases : EXP15, ATEXPA15, ATHEXP ALPHA 1.3, ATEXP15, EXPA15

Description : alpha-class expansin & original description: none


Gene families : OG0000032 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g20677

Target Alias Description ECC score Gene Family Method Actions
AT3G03220 ATEXP13,... expansin A13 0.02 OrthoFinder output from all 47 species
Als_g31390 ATEXPA10,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0041.g026744 EXPA16, ATHEXP... alpha-class expansin & original description: CDS=9-821 0.02 OrthoFinder output from all 47 species
LOC_Os03g06010.1 ATEXPA11, ATHEXP... alpha-class expansin 0.03 OrthoFinder output from all 47 species
LOC_Os03g06020.1 LOC_Os03g06020 alpha-class expansin 0.01 OrthoFinder output from all 47 species
LOC_Os04g15840.1 LOC_Os04g15840 alpha-class expansin 0.02 OrthoFinder output from all 47 species
LOC_Os05g19600.1 LOC_Os05g19600 alpha-class expansin 0.02 OrthoFinder output from all 47 species
MA_10425823g0010 ATEXPA4, ATEXP4,... alpha-class expansin 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0121.g021430 ATEXPA10,... alpha-class expansin & original description: CDS=411-1286 0.02 OrthoFinder output from all 47 species
Solyc10g018500.1.1 ATHEXP BETA 1.4,... Putative expansin-B2 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
InterPro domains Description Start Stop
IPR009009 RlpA-like_DPBB 118 198
IPR007117 Expansin_CBD 210 287
No external refs found!