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  5. Aop_g20584

Aop_g20584 (SYP125, ATSYP125)


Aliases : SYP125, ATSYP125

Description : Qa-type SYP1-group component of SNARE membrane fusion complex & original description: none


Gene families : OG0000392 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000392_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g20584

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00241620 SYP132,... Vesicle trafficking.SNARE target membrane recognition... 0.03 OrthoFinder output from all 47 species
AMTR_s00049p00050990 SYP121,... Vesicle trafficking.SNARE target membrane recognition... 0.04 OrthoFinder output from all 47 species
AMTR_s00111p00136390 ATSYP124,... Vesicle trafficking.SNARE target membrane recognition... 0.03 OrthoFinder output from all 47 species
AT1G11250 SYP125, ATSYP125 syntaxin of plants 125 0.03 OrthoFinder output from all 47 species
AT3G03800 ATSYP131, SYP131 syntaxin of plants 131 0.03 OrthoFinder output from all 47 species
AT3G11820 SYP121,... syntaxin of plants 121 0.06 OrthoFinder output from all 47 species
AT3G52400 SYP122, ATSYP122 syntaxin of plants 122 0.03 OrthoFinder output from all 47 species
AT4G03330 SYP123, ATSYP123 syntaxin of plants 123 0.02 OrthoFinder output from all 47 species
Adi_g081976 SYP125, ATSYP125 Qa-type SYP1-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species
Aev_g00913 ATSYP124, SYP124 Qa-type SYP1-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species
Aev_g06510 ATSYP124, SYP124 Qa-type SYP1-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Ala_g08621 ATSYP124, SYP124 Qa-type SYP1-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Ala_g13018 SYP125, ATSYP125 Qa-type SYP1-group component of SNARE membrane fusion... 0.05 OrthoFinder output from all 47 species
Aob_g01068 SYP125, ATSYP125 Qa-type SYP1-group component of SNARE membrane fusion... 0.05 OrthoFinder output from all 47 species
Aspi01Gene11241.t1 SYP132,... Qa-type SYP1-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Aspi01Gene15933.t1 SYP125,... Qa-type SYP1-group component of SNARE membrane fusion... 0.04 OrthoFinder output from all 47 species
Ceric.09G096900.1 SYP125,... Qa-type SYP1-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Ceric.10G023900.1 SYP125,... Qa-type SYP1-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species
Ceric.11G031700.1 ATSYP124,... Qa-type SYP1-group component of SNARE membrane fusion... 0.04 OrthoFinder output from all 47 species
Ceric.22G024200.1 ATSYP124,... Qa-type SYP1-group component of SNARE membrane fusion... 0.04 OrthoFinder output from all 47 species
Dac_g25872 SYP125, ATSYP125 Qa-type SYP1-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Dcu_g04463 SYP123, ATSYP123 Qa-type SYP1-group component of SNARE membrane fusion... 0.08 OrthoFinder output from all 47 species
Dde_g04282 ATSYP124, SYP124 Qa-type SYP1-group component of SNARE membrane fusion... 0.04 OrthoFinder output from all 47 species
Dde_g18785 SYP125, ATSYP125 Qa-type SYP1-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Ehy_g02362 ATSYP124, SYP124 Qa-type SYP1-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
LOC_Os03g57310.1 SYP121,... SYP1-group Qa-type SNARE component 0.05 OrthoFinder output from all 47 species
LOC_Os06g07200.1 SYP132,... SYP1-group Qa-type SNARE component 0.04 OrthoFinder output from all 47 species
LOC_Os06g39050.1 ATSYP124,... SYP1-group Qa-type SNARE component 0.02 OrthoFinder output from all 47 species
Len_g16913 SYP125, ATSYP125 Qa-type SYP1-group component of SNARE membrane fusion... 0.04 OrthoFinder output from all 47 species
Len_g18253 SYP125, ATSYP125 Qa-type SYP1-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
MA_10427190g0010 ATSYP131, SYP131 SYP1-group Qa-type SNARE component 0.02 OrthoFinder output from all 47 species
MA_28961g0010 SYP125, ATSYP125 SYP1-group Qa-type SNARE component 0.05 OrthoFinder output from all 47 species
Mp2g19600.1 SYP132, ATSYP132 SYP1-group Qa-type SNARE component 0.01 OrthoFinder output from all 47 species
Msp_g10266 SYP125, ATSYP125 Qa-type SYP1-group component of SNARE membrane fusion... 0.04 OrthoFinder output from all 47 species
Nbi_g04229 ATSYP124, SYP124 Qa-type SYP1-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species
Nbi_g08359 SYP125, ATSYP125 Qa-type SYP1-group component of SNARE membrane fusion... 0.05 OrthoFinder output from all 47 species
Ore_g01296 SYP132, ATSYP132 Qa-type SYP1-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species
Ore_g09931 ATSYP124, SYP124 Qa-type SYP1-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species
Ore_g17925 SYP125, ATSYP125 Qa-type SYP1-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Pir_g11139 SYP125, ATSYP125 Qa-type SYP1-group component of SNARE membrane fusion... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0008.g004207 SYP125, ATSYP125 Qa-type SYP1-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0206.g025773 SYP125, ATSYP125 Qa-type SYP1-group component of SNARE membrane fusion... 0.05 OrthoFinder output from all 47 species
Sam_g11699 No alias Qa-type SYP1-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species
Sam_g36661 No alias Qa-type SYP1-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Smo74098 ATSYP124, SYP124 Vesicle trafficking.SNARE target membrane recognition... 0.02 OrthoFinder output from all 47 species
Smo93442 ATSYP124, SYP124 Vesicle trafficking.SNARE target membrane recognition... 0.02 OrthoFinder output from all 47 species
Solyc01g006950.3.1 SYP121,... SYP1-group Qa-type SNARE component 0.05 OrthoFinder output from all 47 species
Solyc07g052470.3.1 SYP132,... SYP1-group Qa-type SNARE component 0.03 OrthoFinder output from all 47 species
Solyc10g081850.3.1 SYP121,... SYP1-group Qa-type SNARE component 0.04 OrthoFinder output from all 47 species
Spa_g04676 ATSYP124, SYP124 Qa-type SYP1-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Spa_g10959 SYP125, ATSYP125 Qa-type SYP1-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Spa_g36395 SYP121,... Qa-type SYP1-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species
Spa_g48264 ATSYP124, SYP124 Qa-type SYP1-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Tin_g28381 SYP125, ATSYP125 Qa-type SYP1-group component of SNARE membrane fusion... 0.07 OrthoFinder output from all 47 species
Tin_g31514 ATSYP124, SYP124 Qa-type SYP1-group component of SNARE membrane fusion... 0.07 OrthoFinder output from all 47 species
Zm00001e005922_P001 SYP121,... SYP1-group Qa-type SNARE component 0.03 OrthoFinder output from all 47 species
Zm00001e011907_P001 SYP121,... no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000727 T_SNARE_dom 238 288
IPR006011 Syntaxin_N 33 236
No external refs found!