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  5. Aop_g20532

Aop_g20532 (ATX1, SDG27)


Aliases : ATX1, SDG27

Description : class-III histone methyltransferase *(Trx) & original description: none


Gene families : OG0004303 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004303_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g20532

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00049p00115800 SDG30, ATX2,... Chromatin organisation.histone modifications.histone... 0.03 OrthoFinder output from all 47 species
AT1G05830 SDG30, ATX2 trithorax-like protein 2 0.04 OrthoFinder output from all 47 species
Adi_g013424 ATX1, SDG27 class-III histone methyltransferase *(Trx) & original... 0.02 OrthoFinder output from all 47 species
Aev_g04886 ATX1, SDG27 class-III histone methyltransferase *(Trx) & original... 0.02 OrthoFinder output from all 47 species
Als_g15203 SDG30, ATX2 class-III histone methyltransferase *(Trx) & original... 0.02 OrthoFinder output from all 47 species
Aob_g29671 ATX1, SDG27 class-III histone methyltransferase *(Trx) & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0054.g033848 ATX1, SDG27 class-III histone methyltransferase *(Trx) & original... 0.03 OrthoFinder output from all 47 species
Cba_g38525 SDG30, ATX2 class-III histone methyltransferase *(Trx) & original... 0.04 OrthoFinder output from all 47 species
Ceric.20G024500.1 SDG30, ATX2,... class-III histone methyltransferase *(Trx) & original... 0.06 OrthoFinder output from all 47 species
Dcu_g05840 ATX1, SDG27 class-III histone methyltransferase *(Trx) & original... 0.03 OrthoFinder output from all 47 species
Ehy_g21792 ATX1, SDG27 class-III histone methyltransferase *(Trx) & original... 0.03 OrthoFinder output from all 47 species
LOC_Os09g04890.1 SDG30, ATX2,... Histone-lysine N-methyltransferase TRX1 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
Sam_g22912 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0008170 N-methyltransferase activity IEP HCCA
MF GO:0008276 protein methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0016278 lysine N-methyltransferase activity IEP HCCA
MF GO:0016279 protein-lysine N-methyltransferase activity IEP HCCA
BP GO:0017038 protein import IEP HCCA
MF GO:0018024 histone lysine N-methyltransferase activity IEP HCCA
MF GO:0042054 histone methyltransferase activity IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR000313 PWWP_dom 519 605
IPR001214 SET_dom 1167 1273
IPR003889 FYrich_C 723 799
IPR003888 FYrich_N 664 714
No external refs found!