1. Home
  2. Species
  3. Amblovenatum opulentum
  4. Sequence
  5. Aop_g19619

Aop_g19619


Description : not classified & original description: none


Gene families : OG0004671 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004671_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g19619

Target Alias Description ECC score Gene Family Method Actions
Aob_g41078 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os01g12540.1 LOC_Os01g12540 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g25881 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_708045g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Pir_g66155 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g10611 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s1030.g027923 No alias not classified & original description: CDS=21-2210 0.04 OrthoFinder output from all 47 species
Solyc10g005910.2.1 Solyc10g005910 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e016417_P001 Zm00001e016417 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000228 nuclear chromosome IEP HCCA
MF GO:0003684 damaged DNA binding IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
CC GO:0005672 transcription factor TFIIA complex IEP HCCA
CC GO:0005694 chromosome IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006367 transcription initiation at RNA polymerase II promoter IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
CC GO:0090575 RNA polymerase II transcription regulator complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR032859 KH_dom-like 558 637
IPR006073 GTP-bd 371 494
IPR006073 GTP-bd 174 295
No external refs found!