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  5. Aop_g19248

Aop_g19248 (NPQ1, AVDE1)


Aliases : NPQ1, AVDE1

Description : violaxanthin de-epoxidase *(VDE) & original description: none


Gene families : OG0006528 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006528_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g19248

Target Alias Description ECC score Gene Family Method Actions
Aob_g01565 NPQ1, AVDE1 violaxanthin de-epoxidase *(VDE) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g05686 NPQ1, AVDE1 violaxanthin de-epoxidase *(VDE) & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g11651 NPQ1, AVDE1 violaxanthin de-epoxidase *(VDE) & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os04g31040.1 NPQ1, AVDE1,... violaxanthin de-epoxidase. violaxanthin de-epoxidase (VDE) 0.03 OrthoFinder output from all 47 species
Mp7g15960.1 NPQ1, AVDE1 violaxanthin de-epoxidase. violaxanthin de-epoxidase (VDE) 0.02 OrthoFinder output from all 47 species
Nbi_g29646 NPQ1, AVDE1 violaxanthin de-epoxidase *(VDE) & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g43709 NPQ1, AVDE1 violaxanthin de-epoxidase *(VDE) & original description: none 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046422 violaxanthin de-epoxidase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004751 ribose-5-phosphate isomerase activity IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006801 superoxide metabolic process IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
BP GO:0009052 pentose-phosphate shunt, non-oxidative branch IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016860 intramolecular oxidoreductase activity IEP HCCA
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0072593 reactive oxygen species metabolic process IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
InterPro domains Description Start Stop
IPR010788 VDE_dom 137 377
No external refs found!