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  5. Aop_g18980

Aop_g18980


Description : not classified & original description: none


Gene families : OG0007618 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007618_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g18980
Cluster HCCA: Cluster_51

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0087.g042351 No alias not classified & original description: CDS=54-1232 0.03 OrthoFinder output from all 47 species
Ceric.17G060600.1 Ceric.17G060600 not classified & original description: pacid=50617246... 0.04 OrthoFinder output from all 47 species
LOC_Os05g33230.1 LOC_Os05g33230 Protein ABCI12, chloroplastic OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Lfl_g00850 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g16144 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g13488 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g13489 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g080300.4.1 Solyc01g080300 Protein ABCI12, chloroplastic OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Tin_g01773 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e026821_P001 Zm00001e026821 Protein ABCI12, chloroplastic OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004751 ribose-5-phosphate isomerase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
BP GO:0009052 pentose-phosphate shunt, non-oxidative branch IEP HCCA
BP GO:0015074 DNA integration IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016860 intramolecular oxidoreductase activity IEP HCCA
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR003339 ABC/ECF_trnsptr_transmembrane 111 355
No external refs found!