Description : 35.1.5 not ontology.pentatricopeptide (PPR) repeat-containing protein Pentatricopeptide Repeat Protein containing the DYW motif. Required for editing of multiple plastid transcripts. Endonuclease activity. CHLORORESPIRATORY REDUCTION22 (CRR22)

Gene families : OG_01_0006634 (Gene family) Phylogenetic Tree(s): OG0006634_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR network (cutoff 100): MA_10430355g0010

Target Alias Description ECC score Gene Family Method Actions
AT1G32415 No alias pentatricopeptide (PPR) repeat-containing protein 0.04 Gene family
AT2G34400 No alias Pentatricopeptide repeat (PPR-like) superfamily protein 0.02 Gene family
GSVIVT01016874001 No alias 35.1.5 not ontology.pentatricopeptide (PPR)... 0.07 Gene family
LOC_Os05g24150 Os05g0307200 No description available 0.07 Gene family
Solyc07g009220.2.1 Solyc07g009220.2 No description available 0.07 Gene family
Zm00001d022394 GRMZM2G326263 No description available 0.1 Gene family

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR032867 DYW_dom 470 549
IPR002885 Pentatricopeptide_repeat 69 94
IPR002885 Pentatricopeptide_repeat 372 396
IPR002885 Pentatricopeptide_repeat 1 41
IPR002885 Pentatricopeptide_repeat 196 243
IPR002885 Pentatricopeptide_repeat 297 344
IPR002885 Pentatricopeptide_repeat 95 142
No external refs found!