1. Home
  2. Species
  3. Amblovenatum opulentum
  4. Sequence
  5. Aop_g18716

Aop_g18716 (CYCB2;2)


Aliases : CYCB2;2

Description : not classified & original description: none


Gene families : OG0000745 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000745_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g18716
Cluster HCCA: Cluster_50

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00032080 CYCB2;3,... Cell cycle.regulation.cyclins.CYCB-type cyclin 0.08 OrthoFinder output from all 47 species
AMTR_s00101p00131830 CYCB1;1, CYCB1,... Cell cycle.regulation.cyclins.CYCB-type cyclin 0.06 OrthoFinder output from all 47 species
AT1G76310 CYCB2;4 CYCLIN B2;4 0.03 OrthoFinder output from all 47 species
AT4G35620 CYCB2;2 Cyclin B2;2 0.03 OrthoFinder output from all 47 species
Adi_g082397 CYCB2;2 regulatory protein *(CYCB) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Ala_g23920 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.04 OrthoFinder output from all 47 species
Als_g15872 CYCB1;2, CYC1BAT not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g16595 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.05 OrthoFinder output from all 47 species
Als_g29465 CYCB1;2, CYC1BAT regulatory protein *(CYCB) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Als_g52020 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Als_g58773 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.05 OrthoFinder output from all 47 species
Aspi01Gene30752.t1 CYCB2;3, Aspi01Gene30752 regulatory protein *(CYCB) of cell cycle & original... 0.05 OrthoFinder output from all 47 species
Aspi01Gene31815.t1 CYCB2;3, Aspi01Gene31815 regulatory protein *(CYCB) of cell cycle & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene63213.t2 CYCB2;3, Aspi01Gene63213 regulatory protein *(CYCB) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Ceric.06G046300.1 CYCB2;3, Ceric.06G046300 regulatory protein *(CYCB) of cell cycle & original... 0.05 OrthoFinder output from all 47 species
Ceric.18G071600.1 CYCB2;3, Ceric.18G071600 regulatory protein *(CYCB) of cell cycle & original... 0.06 OrthoFinder output from all 47 species
Ceric.21G047800.1 CYCB2;3, Ceric.21G047800 regulatory protein *(CYCB) of cell cycle & original... 0.04 OrthoFinder output from all 47 species
Ceric.24G055000.1 CYCB2;3, Ceric.24G055000 regulatory protein *(CYCB) of cell cycle & original... 0.1 OrthoFinder output from all 47 species
Ceric.26G002300.1 CYCB2;3, Ceric.26G002300 regulatory protein *(CYCB) of cell cycle & original... 0.05 OrthoFinder output from all 47 species
Ceric.31G034200.1 CYCB2;3, Ceric.31G034200 regulatory protein *(CYCB) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Dcu_g01163 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.05 OrthoFinder output from all 47 species
Dcu_g03733 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.05 OrthoFinder output from all 47 species
Dcu_g08761 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01009895001 CYCB2;3 Cell cycle.regulation.cyclins.CYCB-type cyclin 0.05 OrthoFinder output from all 47 species
GSVIVT01025781001 CYCB1;2, CYC1BAT Cell cycle.regulation.cyclins.CYCB-type cyclin 0.05 OrthoFinder output from all 47 species
GSVIVT01032782001 CYCB1;2, CYC1BAT Cell cycle.regulation.cyclins.CYCB-type cyclin 0.06 OrthoFinder output from all 47 species
GSVIVT01036739001 CYCB3;1 Cell cycle.regulation.cyclins.CYCB-type cyclin 0.05 OrthoFinder output from all 47 species
Gb_01761 CYCB3;1 cyclin (CYCB) 0.03 OrthoFinder output from all 47 species
Gb_03506 CYCB1;4 cyclin (CYCB) 0.07 OrthoFinder output from all 47 species
Gb_10664 CYCB2;3 cyclin (CYCB) 0.06 OrthoFinder output from all 47 species
Gb_27795 CYCB1;2, CYC1BAT G2/mitotic-specific cyclin-1 OS=Antirrhinum majus... 0.07 OrthoFinder output from all 47 species
LOC_Os01g59120.1 CYCB1;2,... cyclin (CYCB) 0.05 OrthoFinder output from all 47 species
LOC_Os04g47580.1 CYCB2;3, LOC_Os04g47580 cyclin (CYCB) 0.06 OrthoFinder output from all 47 species
LOC_Os05g41390.1 CYCB1;2,... cyclin (CYCB) 0.03 OrthoFinder output from all 47 species
LOC_Os06g51110.2 CYCB2;3, LOC_Os06g51110 cyclin (CYCB) 0.06 OrthoFinder output from all 47 species
Len_g03835 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.04 OrthoFinder output from all 47 species
Len_g05365 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Lfl_g25214 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
MA_10428837g0030 CYCB1;3, CYC2 cyclin (CYCB) 0.07 OrthoFinder output from all 47 species
MA_10433093g0020 CYCB2;3 Cyclin-B2-1 OS=Oryza sativa subsp. indica... 0.04 OrthoFinder output from all 47 species
MA_127335g0010 CYCB2;3 cyclin (CYCB) 0.06 OrthoFinder output from all 47 species
MA_311439g0010 CYCB1;3, CYC2 cyclin (CYCB) 0.03 OrthoFinder output from all 47 species
MA_855375g0010 CYCB2;3 Cyclin-B2-1 OS=Oryza sativa subsp. indica... 0.07 OrthoFinder output from all 47 species
Mp2g00590.1 CYCB2;3 cyclin (CYCB) 0.02 OrthoFinder output from all 47 species
Mp5g10030.1 CYCB2;2 cyclin (CYCB) 0.03 OrthoFinder output from all 47 species
Msp_g05360 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.08 OrthoFinder output from all 47 species
Msp_g07854 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Msp_g21114 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.08 OrthoFinder output from all 47 species
Msp_g42899 CYCB2;4 regulatory protein *(CYCB) of cell cycle & original... 0.05 OrthoFinder output from all 47 species
Nbi_g03000 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.05 OrthoFinder output from all 47 species
Nbi_g04270 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.05 OrthoFinder output from all 47 species
Nbi_g39363 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.08 OrthoFinder output from all 47 species
Sacu_v1.1_s0031.g010562 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0210.g025884 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Smo230742 CYCB1;2, CYC1BAT Cell cycle.regulation.cyclins.CYCB-type cyclin 0.04 OrthoFinder output from all 47 species
Solyc01g009040.4.1 CYCB1;2,... cyclin (CYCB) 0.06 OrthoFinder output from all 47 species
Solyc03g032190.3.1 CYCB2;3, Solyc03g032190 cyclin (CYCB) 0.02 OrthoFinder output from all 47 species
Solyc07g066660.4.1 CYCB3;1, Solyc07g066660 cyclin (CYCB) 0.02 OrthoFinder output from all 47 species
Spa_g52264 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.09 OrthoFinder output from all 47 species
Zm00001e007244_P001 CYCB2;3, Zm00001e007244 cyclin (CYCB) 0.04 OrthoFinder output from all 47 species
Zm00001e019528_P002 CYCB1;2,... cyclin (CYCB) 0.03 OrthoFinder output from all 47 species
Zm00001e028899_P002 CYCB1;2,... cyclin (CYCB) 0.05 OrthoFinder output from all 47 species
Zm00001e030146_P001 CYCB2;3, Zm00001e030146 cyclin (CYCB) 0.03 OrthoFinder output from all 47 species
Zm00001e041485_P001 CYCB2;3, Zm00001e041485 cyclin (CYCB) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000154 rRNA modification IEP HCCA
BP GO:0001510 RNA methylation IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008170 N-methyltransferase activity IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
MF GO:0008649 rRNA methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016436 rRNA (uridine) methyltransferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
BP GO:0031167 rRNA methylation IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
MF GO:0070042 rRNA (uridine-N3-)-methyltransferase activity IEP HCCA
BP GO:0070475 rRNA base methylation IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140102 catalytic activity, acting on a rRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR006671 Cyclin_N 238 301
No external refs found!