1. Home
  2. Species
  3. Amblovenatum opulentum
  4. Sequence
  5. Aop_g18706

Aop_g18706 (POLGAMMA2)


Aliases : POLGAMMA2

Description : DNA polymerase *(POP) & original description: none


Gene families : OG0003071 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003071_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g18706

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00062p00102370 POLGAMMA2,... Cell cycle.organelle machineries.DNA replication.DNA... 0.02 OrthoFinder output from all 47 species
AT1G50840 POLGAMMA2 polymerase gamma 2 0.03 OrthoFinder output from all 47 species
Adi_g012327 POLGAMMA2 DNA polymerase *(POP) & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g03409 POLGAMMA2 DNA polymerase *(POP) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g12949 POLGAMMA2 DNA polymerase *(POP) & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0045.g029951 POLGAMMA2 DNA polymerase *(POP) & original description: CDS=416-3655 0.03 OrthoFinder output from all 47 species
Cre08.g363837 POLGAMMA1 Cell cycle.organelle machineries.DNA replication.DNA... 0.02 OrthoFinder output from all 47 species
GSVIVT01014163001 POLGAMMA2 Cell cycle.organelle machineries.DNA replication.DNA... 0.02 OrthoFinder output from all 47 species
LOC_Os08g07840.1 POLGAMMA2, LOC_Os08g07840 DNA polymerase (POP) 0.02 OrthoFinder output from all 47 species
Lfl_g02364 POLGAMMA2 DNA polymerase *(POP) & original description: none 0.04 OrthoFinder output from all 47 species
MA_10436291g0010 POLGAMMA2 DNA polymerase (POP) 0.02 OrthoFinder output from all 47 species
Mp3g17010.1 POLGAMMA2 DNA polymerase (POP) 0.02 OrthoFinder output from all 47 species
Pir_g12226 POLGAMMA2 DNA polymerase *(POP) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g03974 POLGAMMA2 DNA polymerase *(POP) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g06763 POLGAMMA2 DNA polymerase *(POP) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g07091 POLGAMMA2 DNA polymerase *(POP) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e041749_P001 POLGAMMA2, Zm00001e041749 DNA polymerase (POP) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
BP GO:0006139 nucleobase-containing compound metabolic process IEA Interproscan
MF GO:0008408 3'-5' exonuclease activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006396 RNA processing IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001098 DNA-dir_DNA_pol_A_palm_dom 704 832
IPR001098 DNA-dir_DNA_pol_A_palm_dom 854 1036
IPR002562 3'-5'_exonuclease_dom 285 485
No external refs found!