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  5. Aop_g18615

Aop_g18615 (HY3, OOP1, PHYB)


Aliases : HY3, OOP1, PHYB

Description : temperature sensor protein *(PHY-B) & original description: none


Gene families : OG0000699 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000699_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g18615

Target Alias Description ECC score Gene Family Method Actions
AT4G18130 PHYE phytochrome E 0.03 OrthoFinder output from all 47 species
Als_g06575 HY3, OOP1, PHYB not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene59146.t1 HY3, OOP1, PHYB,... temperature sensor protein *(PHY-B) & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g22693 HY3, OOP1, PHYB not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os03g19590.1 HY3, OOP1, PHYB,... phytochrome photoreceptor (PHY). temperature sensor... 0.06 OrthoFinder output from all 47 species
MA_6809g0010 FHY2, HY8, PHYA, FRE1 phytochrome photoreceptor (PHY) 0.02 OrthoFinder output from all 47 species
MA_6809g0020 FHY2, HY8, PHYA, FRE1 phytochrome photoreceptor (PHY) 0.02 OrthoFinder output from all 47 species
Msp_g14660 HY3, OOP1, PHYB temperature sensor protein *(PHY-B) & original description: none 0.08 OrthoFinder output from all 47 species
Msp_g26661 HY3, OOP1, PHYB phytochrome photoreceptor *(PHY) & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g29042 HY3, OOP1, PHYB temperature sensor protein *(PHY-B) & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g35990 HY3, OOP1, PHYB temperature sensor protein *(PHY-B) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g10642 HY3, OOP1, PHYB temperature sensor protein *(PHY-B) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g059870.4.1 HY3, OOP1, PHYB,... phytochrome photoreceptor (PHY). temperature sensor... 0.02 OrthoFinder output from all 47 species
Solyc07g045480.3.1 PHYC, Solyc07g045480 phytochrome photoreceptor (PHY) 0.04 OrthoFinder output from all 47 species
Spa_g14459 FHY2, HY8, PHYA, FRE1 phytochrome photoreceptor *(PHY) & original description: none 0.09 OrthoFinder output from all 47 species
Zm00001e001462_P001 HY3, OOP1, PHYB,... phytochrome photoreceptor (PHY). temperature sensor... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR013767 PAS_fold 621 736
IPR013767 PAS_fold 752 874
IPR003661 HisK_dim/P 900 958
IPR013515 Phytochrome_cen-reg 416 589
IPR013654 PAS_2 73 188
IPR003594 HATPase_C 1008 1119
IPR003018 GAF 222 403
No external refs found!