1. Home
  2. Species
  3. Amblovenatum opulentum
  4. Sequence
  5. Aop_g18599

Aop_g18599


Description : E3 ubiquitin ligase & original description: none


Gene families : OG0000864 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000864_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g18599
Cluster HCCA: Cluster_53

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00116980 evm_27.TU.AmTr_v1... U-box domain-containing protein 62 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Adi_g024353 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g112813 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Als_g32249 No alias E3 ubiquitin ligase & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g28677 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0141.g051337 No alias E3 ubiquitin ligase & original description: CDS=102-1823 0.03 OrthoFinder output from all 47 species
Azfi_s0350.g066547 No alias E3 ubiquitin ligase & original description: CDS=532-2124 0.03 OrthoFinder output from all 47 species
Ceric.34G024200.1 Ceric.34G024200 E3 ubiquitin ligase & original description:... 0.03 OrthoFinder output from all 47 species
Dcu_g47007 No alias E3 ubiquitin ligase & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g01655 No alias E3 ubiquitin ligase & original description: none 0.04 OrthoFinder output from all 47 species
Gb_06756 No alias U-box domain-containing protein 62 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Mp3g02140.1 No alias U-box domain-containing protein 62 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Mp3g08800.1 No alias U-box domain-containing protein 62 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Pir_g04513 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g32791 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g17020 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0164.g024071 No alias E3 ubiquitin ligase & original description: CDS=306-1907 0.02 OrthoFinder output from all 47 species
Sam_g07885 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g49248 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Solyc04g009340.3.1 Solyc04g009340 U-box domain-containing protein 63 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Spa_g50858 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004730 pseudouridylate synthase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0010181 FMN binding IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!