Aop_g18323


Description : not classified & original description: none


Gene families : OG0004400 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004400_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g18323

Target Alias Description ECC score Gene Family Method Actions
AT4G30990 No alias ARM repeat superfamily protein 0.04 OrthoFinder output from all 47 species
Aev_g15020 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g14333 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene21755.t1 Aspi01Gene21755 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.31G030600.1 Ceric.31G030600 not classified & original description: pacid=50574249... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000137.1 No alias No description available 0.03 OrthoFinder output from all 47 species
Cre10.g461000 No alias No description available 0.02 OrthoFinder output from all 47 species
GSVIVT01021009001 No alias No description available 0.04 OrthoFinder output from all 47 species
LOC_Os01g40250.1 LOC_Os01g40250 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Lfl_g13195 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_131618g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_51913g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Ore_g38147 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g42096 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g17460 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo444016 No alias No description available 0.03 OrthoFinder output from all 47 species
Spa_g17782 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g27076 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Zm00001e016650_P001 Zm00001e016650 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
BP GO:0006913 nucleocytoplasmic transport IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0017056 structural constituent of nuclear pore IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0051169 nuclear transport IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR046523 UTP20_C 1820 2036
IPR011430 UTP20_N 951 1542
No external refs found!