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  5. Aop_g17555

Aop_g17555 (OTP82)


Aliases : OTP82

Description : not classified & original description: none


Gene families : OG0002037 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002037_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g17555
Cluster HCCA: Cluster_283

Target Alias Description ECC score Gene Family Method Actions
Adi_g021818 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0760.g085614 OTP82 not classified & original description: CDS=119-1039 0.03 OrthoFinder output from all 47 species
Ceric.16G082900.1 OTP82, Ceric.16G082900 not classified & original description: pacid=50589499... 0.04 OrthoFinder output from all 47 species
Ceric.22G033800.1 Ceric.22G033800 not classified & original description: pacid=50614443... 0.03 OrthoFinder output from all 47 species
Dde_g17663 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g26527 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01020757001 No alias Pentatricopeptide repeat-containing protein At2g41080... 0.02 OrthoFinder output from all 47 species
Len_g16899 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g08645 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g17709 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g00847 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0057.g014719 OTP82 not classified & original description: CDS=89-988 0.03 OrthoFinder output from all 47 species
Sam_g17797 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g20131 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g04188 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g04428 OTP82 not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
CC GO:0030684 preribosome IEP HCCA
CC GO:0030688 preribosome, small subunit precursor IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR032867 DYW_dom 213 305
No external refs found!