Aliases : PSBR
Description : component *(PsbR) of PS-II complex & original description: none
Gene families : OG0002211 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002211_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Aop_g17008 | |
Cluster | HCCA: Cluster_305 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT1G79040 | PSBR | photosystem II subunit R | 0.04 | OrthoFinder output from all 47 species | |
Als_g62878 | PSBR | component *(PsbR) of PS-II complex & original description: none | 0.07 | OrthoFinder output from all 47 species | |
Cba_g21838 | PSBR | component *(PsbR) of PS-II complex & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Cre06.g261000 | PSBR | Photosynthesis.photophosphorylation.photosystem II.PS-II... | 0.04 | OrthoFinder output from all 47 species | |
Dcu_g28297 | PSBR | component *(PsbR) of PS-II complex & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Pnu_g31183 | PSBR | component *(PsbR) of PS-II complex & original description: none | 0.08 | OrthoFinder output from all 47 species | |
Pp3c16_5650V3.1 | PSBR, Pp3c16_5650 | photosystem II subunit R | 0.02 | OrthoFinder output from all 47 species | |
Pp3c27_2340V3.1 | PSBR, Pp3c27_2340 | photosystem II subunit R | 0.04 | OrthoFinder output from all 47 species | |
Ppi_g12792 | PSBR | component *(PsbR) of PS-II complex & original description: none | 0.07 | OrthoFinder output from all 47 species | |
Ppi_g12793 | PSBR | component *(PsbR) of PS-II complex & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ppi_g27322 | PSBR | component *(PsbR) of PS-II complex & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ppi_g27323 | PSBR | component *(PsbR) of PS-II complex & original description: none | 0.06 | OrthoFinder output from all 47 species | |
Zm00001e021601_P001 | PSBR, Zm00001e021601 | component PsbR of PS-II complex | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0009523 | photosystem II | IEA | Interproscan |
CC | GO:0009654 | photosystem II oxygen evolving complex | IEA | Interproscan |
BP | GO:0015979 | photosynthesis | IEA | Interproscan |
CC | GO:0042651 | thylakoid membrane | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003674 | molecular_function | IEP | HCCA |
MF | GO:0003735 | structural constituent of ribosome | IEP | HCCA |
MF | GO:0005198 | structural molecule activity | IEP | HCCA |
CC | GO:0005840 | ribosome | IEP | HCCA |
BP | GO:0006412 | translation | IEP | HCCA |
BP | GO:0006518 | peptide metabolic process | IEP | HCCA |
BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0009058 | biosynthetic process | IEP | HCCA |
BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
CC | GO:0009522 | photosystem I | IEP | HCCA |
CC | GO:0009538 | photosystem I reaction center | IEP | HCCA |
CC | GO:0015934 | large ribosomal subunit | IEP | HCCA |
BP | GO:0019538 | protein metabolic process | IEP | HCCA |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | HCCA |
BP | GO:0043043 | peptide biosynthetic process | IEP | HCCA |
BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
CC | GO:0043226 | organelle | IEP | HCCA |
CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
CC | GO:0043229 | intracellular organelle | IEP | HCCA |
CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
BP | GO:0043603 | amide metabolic process | IEP | HCCA |
BP | GO:0043604 | amide biosynthetic process | IEP | HCCA |
BP | GO:0044238 | primary metabolic process | IEP | HCCA |
BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
CC | GO:0044391 | ribosomal subunit | IEP | HCCA |
BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
CC | GO:1990904 | ribonucleoprotein complex | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR006814 | PSII_PsbR | 34 | 144 |
No external refs found! |