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  5. Aop_g16530

Aop_g16530


Description : amino acid transporter *(LAT) & original description: none


Gene families : OG0000891 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000891_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g16530
Cluster HCCA: Cluster_100

Target Alias Description ECC score Gene Family Method Actions
AT3G19553 No alias Amino acid permease family protein 0.02 OrthoFinder output from all 47 species
Aev_g01252 No alias amino acid transporter *(LAT) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g05668 No alias amino acid transporter *(LAT) & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os03g25920.1 LOC_Os03g25920 amino acid transporter (LAT) 0.02 OrthoFinder output from all 47 species
Ore_g34805 No alias amino acid transporter *(LAT) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g13404 No alias amino acid transporter *(LAT) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g005920.3.1 Solyc01g005920 amino acid transporter (LAT) 0.02 OrthoFinder output from all 47 species
Zm00001e001820_P001 Zm00001e001820 amino acid transporter (LAT) 0.03 OrthoFinder output from all 47 species
Zm00001e015550_P001 Zm00001e015550 amino acid transporter (LAT) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
MF GO:0022857 transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
InterPro domains Description Start Stop
IPR002293 AA/rel_permease1 32 432
No external refs found!