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  5. Aop_g16334

Aop_g16334


Description : not classified & original description: none


Gene families : OG0004023 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004023_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g16334
Cluster HCCA: Cluster_51

Target Alias Description ECC score Gene Family Method Actions
Ala_g16234 CRM3, HCF152 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.12G037000.1 Ceric.12G037000 not classified & original description: pacid=50600637... 0.03 OrthoFinder output from all 47 species
Ceric.1Z219100.1 Ceric.1Z219100 not classified & original description: pacid=50617071... 0.03 OrthoFinder output from all 47 species
Dcu_g15035 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g16155 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0005546 phosphatidylinositol-4,5-bisphosphate binding IEP HCCA
BP GO:0006887 exocytosis IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0046903 secretion IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
BP GO:0140352 export from cell IEP HCCA
MF GO:1901981 phosphatidylinositol phosphate binding IEP HCCA
MF GO:1902936 phosphatidylinositol bisphosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 143 186
IPR002885 Pentatricopeptide_repeat 234 282
IPR002885 Pentatricopeptide_repeat 415 469
IPR002885 Pentatricopeptide_repeat 351 397
IPR002885 Pentatricopeptide_repeat 319 340
No external refs found!