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Aliases : SPL1
Description : SBP-type transcription factor & original description: none
Gene families : OG0001309 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001309_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Lfl_g10194 | |
| Cluster | HCCA: Cluster_93 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Aspi01Gene39329.t1 | SPL1, Aspi01Gene39329 | SBP-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_16835g0010 | SPL1 | Squamosa promoter-binding-like protein 1 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g01911 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g29634 | SPL1 | SBP-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0025.g009405 | SPL12 | SBP-type transcription factor & original description:... | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0093.g019102 | SPL1 | SBP-type transcription factor & original description: CDS=1-3150 | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g39394 | No alias | SBP-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g51231 | No alias | SBP-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Solyc01g068100.4.1 | SPL1, Solyc01g068100 | Squamosa promoter-binding-like protein 1 OS=Arabidopsis... | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e003571_P002 | Zm00001e003571 | transcription factor (SBP) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e025436_P002 | SPL1, Zm00001e025436 | transcription factor (SBP) | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003677 | DNA binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004843 | cysteine-type deubiquitinase activity | IEP | HCCA |
| MF | GO:0005509 | calcium ion binding | IEP | HCCA |
| MF | GO:0008234 | cysteine-type peptidase activity | IEP | HCCA |
| BP | GO:0016579 | protein deubiquitination | IEP | HCCA |
| MF | GO:0019783 | ubiquitin-like protein peptidase activity | IEP | HCCA |
| BP | GO:0070646 | protein modification by small protein removal | IEP | HCCA |
| BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | HCCA |
| MF | GO:0101005 | deubiquitinase activity | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR004333 | SBP_dom | 197 | 270 |
| No external refs found! |