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Aliases : VAC1, ECB2, ATECB2
Description : ssDNA-binding protein *(OSB) & original description: none
Gene families : OG0000043 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Adi_g010386 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g021711 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g022715 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g045649 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g065636 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g077328 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g05826 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g07187 | OTP86 | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g07789 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g08080 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g32445 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g38619 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g05733 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g05735 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Als_g06077 | CRR22 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g07076 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g07346 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g07408 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g17868 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g18745 | CRR22 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Als_g18792 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g19167 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Als_g19221 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g19289 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g26692 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g26697 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g30421 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g30593 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g32527 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g54731 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g55254 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g55328 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g27300 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g04899 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g05723 | OTP86 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g06180 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g08925 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g10554 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g21145 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g22370 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g29464 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g31791 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0092.g042984 | No alias | not classified & original description: CDS=1-3306 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0131.g049164 | No alias | not classified & original description: CDS=1-2763 | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0250.g060258 | No alias | not classified & original description: CDS=1-1893 | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0345.g065805 | No alias | not classified & original description: CDS=1-2679 | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0469.g072874 | CRR22 | not classified & original description: CDS=1-1206 | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s1399.g102577 | No alias | not classified & original description: CDS=1-951 | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g05221 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g07738 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g20743 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g23174 | CRR22 | ssDNA-binding protein *(OSB) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g35200 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g67874 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.03G033500.1 | Ceric.03G033500 | not classified & original description: pacid=50573115... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.11G019200.1 | Ceric.11G019200 | not classified & original description: pacid=50596467... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.11G091700.1 | Ceric.11G091700 | ssDNA-binding protein *(OSB) & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.21G027500.1 | Ceric.21G027500 | not classified & original description: pacid=50603039... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.23G026100.1 | Ceric.23G026100 | not classified & original description: pacid=50611257... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.29G083700.1 | Ceric.29G083700 | not classified & original description: pacid=50625623... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.37G043200.1 | Ceric.37G043200 | not classified & original description: pacid=50616612... | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g07110 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g09663 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g10603 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g11875 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g14985 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g20901 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g28876 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g31479 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g02401 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g06991 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g18186 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g24117 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g51784 | OTP86 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g04235 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g11914 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g16774 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g01227 | CRR22 | ssDNA-binding protein *(OSB) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g09569 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g13202 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g14856 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g17300 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g19188 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g22634 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g23960 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g26750 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g31613 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g45899 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g07764 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g16452 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g17001 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g18405 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g25433 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g36335 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g16220 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g18859 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g19941 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g20234 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g29461 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g43649 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g57078 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Pir_g59802 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g60441 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g62227 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g64508 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g02334 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g02336 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g03867 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g06936 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g15493 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g16307 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g18868 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g18939 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g55179 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0049.g013724 | No alias | not classified & original description: CDS=1-1671 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0061.g015366 | No alias | not classified & original description: CDS=1-2334 | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g08783 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g08784 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g56966 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g57330 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g06050 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g08688 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g08795 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g09995 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g13975 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g21953 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g28391 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g37478 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g41036 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g46161 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0001522 | pseudouridine synthesis | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003677 | DNA binding | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| CC | GO:0005667 | transcription regulator complex | IEP | HCCA |
| CC | GO:0005669 | transcription factor TFIID complex | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006352 | DNA-templated transcription initiation | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| BP | GO:0009451 | RNA modification | IEP | HCCA |
| MF | GO:0009982 | pseudouridine synthase activity | IEP | HCCA |
| BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
| MF | GO:0016866 | intramolecular transferase activity | IEP | HCCA |
| BP | GO:0032774 | RNA biosynthetic process | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| CC | GO:0090575 | RNA polymerase II transcription regulator complex | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 331 | 361 |
| IPR002885 | Pentatricopeptide_repeat | 303 | 329 |
| IPR002885 | Pentatricopeptide_repeat | 419 | 443 |
| IPR046848 | E_motif | 780 | 819 |
| IPR002885 | Pentatricopeptide_repeat | 445 | 492 |
| IPR002885 | Pentatricopeptide_repeat | 562 | 608 |
| IPR002885 | Pentatricopeptide_repeat | 228 | 274 |
| IPR002885 | Pentatricopeptide_repeat | 663 | 710 |
| No external refs found! |