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  5. Aop_g15697

Aop_g15697 (VAC1, ECB2, ATECB2)


Aliases : VAC1, ECB2, ATECB2

Description : not classified & original description: none


Gene families : OG0016926 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0016926_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g15697
Cluster HCCA: Cluster_269

Target Alias Description ECC score Gene Family Method Actions
Ceric.24G025900.1 Ceric.24G025900 not classified & original description: pacid=50629515... 0.07 OrthoFinder output from all 47 species
Len_g18063 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g08053 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g38343 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g63390 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ppi_g14893 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0012.g005461 No alias not classified & original description: CDS=1-2256 0.03 OrthoFinder output from all 47 species
Tin_g27969 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 116 162
IPR002885 Pentatricopeptide_repeat 318 367
IPR002885 Pentatricopeptide_repeat 217 263
IPR002885 Pentatricopeptide_repeat 15 57
IPR002885 Pentatricopeptide_repeat 394 416
IPR002885 Pentatricopeptide_repeat 191 213
IPR002885 Pentatricopeptide_repeat 494 518
IPR002885 Pentatricopeptide_repeat 422 451
No external refs found!