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  5. Aop_g14661

Aop_g14661


Description : not classified & original description: none


Gene families : OG0005520 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005520_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g14661

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00062p00113470 evm_27.TU.AmTr_v1... DEAD-box ATP-dependent RNA helicase 35 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Cba_g12117 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.25G040400.1 Ceric.25G040400 not classified & original description: pacid=50594395... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021012.34 No alias DEAD-box ATP-dependent RNA helicase 35 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Cre07.g334200 No alias DEAD-box ATP-dependent RNA helicase 35 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Dac_g11073 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g03191 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp4g18960.1 No alias DEAD-box ATP-dependent RNA helicase 35 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Nbi_g01265 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g25247 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g09581 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g09869 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
CC GO:0005956 protein kinase CK2 complex IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0019207 kinase regulator activity IEP HCCA
MF GO:0019887 protein kinase regulator activity IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
CC GO:1902554 serine/threonine protein kinase complex IEP HCCA
CC GO:1902911 protein kinase complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR011545 DEAD/DEAH_box_helicase_dom 217 397
IPR001650 Helicase_C 433 540
No external refs found!