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  5. Aop_g14438

Aop_g14438 (ATICE1, ICE1, SCRM)


Aliases : ATICE1, ICE1, SCRM

Description : transcription factor *(ICE1/2) & original description: none


Gene families : OG0001330 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001330_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g14438

Target Alias Description ECC score Gene Family Method Actions
AT3G26744 ATICE1, ICE1, SCRM basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G10570 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
Ala_g04435 SCRM2, ICE2 transcription factor *(ICE1/2) & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g17032 SCRM2, ICE2 transcription factor *(ICE1/2) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene66445.t1 ATICE1, ICE1,... transcription factor *(ICE1/2) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0007.g010652 SCRM2, ICE2 bHLH-type transcription factor & original description: CDS=1-1947 0.03 OrthoFinder output from all 47 species
Cba_g26604 ATICE1, ICE1, SCRM bHLH-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g75218 SCRM2, ICE2 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.11G026200.1 SCRM2, ICE2,... transcription factor *(ICE1/2) & original description:... 0.03 OrthoFinder output from all 47 species
Dde_g02958 SCRM2, ICE2 transcription factor *(ICE1/2) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g17361 SCRM2, ICE2 transcription factor *(ICE1/2) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01032998001 ATICE1, ICE1, SCRM External stimuli response.temperature.ICE-CBF cold... 0.05 OrthoFinder output from all 47 species
MA_448849g0010 ATICE1, ICE1, SCRM transcription factor (bHLH). transcription factor (ICE1|2) 0.02 OrthoFinder output from all 47 species
Msp_g15581 ATICE1, ICE1, SCRM transcription factor *(ICE1/2) & original description: none 0.03 OrthoFinder output from all 47 species
Smo77288 SCRM2, ICE2 RNA biosynthesis.transcriptional activation.bHLH... 0.03 OrthoFinder output from all 47 species
Spa_g04208 SCRM2, ICE2 transcription factor *(ICE1/2) & original description: none 0.07 OrthoFinder output from all 47 species
Spa_g06696 SCRM2, ICE2 transcription factor *(ICE1/2) & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g22348 SCRM2, ICE2 transcription factor *(ICE1/2) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g53770 ATICE1, ICE1, SCRM transcription factor *(ICE1/2) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g30227 ATICE1, ICE1, SCRM not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e021526_P001 ATICE1, ICE1,... transcription factor (bHLH). transcription factor (ICE1|2) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
BP GO:0051180 vitamin transport IEP HCCA
MF GO:0090482 vitamin transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR011598 bHLH_dom 509 551
No external refs found!