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  5. Aop_g14393

Aop_g14393


Description : not classified & original description: none


Gene families : OG0011807 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0011807_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g14393
Cluster HCCA: Cluster_327

Target Alias Description ECC score Gene Family Method Actions
Ala_g10799 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0003.g008078 No alias not classified & original description: CDS=1-2820 0.03 OrthoFinder output from all 47 species
Cba_g04067 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.04G034200.1 Ceric.04G034200 not classified & original description: pacid=50630740... 0.06 OrthoFinder output from all 47 species
Dac_g12077 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g24878 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g07929 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g20497 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g40006 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g04731 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 166 213
IPR002885 Pentatricopeptide_repeat 575 612
IPR002885 Pentatricopeptide_repeat 678 724
IPR002885 Pentatricopeptide_repeat 271 318
IPR002885 Pentatricopeptide_repeat 473 520
IPR002885 Pentatricopeptide_repeat 373 420
IPR002885 Pentatricopeptide_repeat 852 875
IPR002885 Pentatricopeptide_repeat 347 372
IPR002885 Pentatricopeptide_repeat 549 574
IPR002885 Pentatricopeptide_repeat 752 777
IPR002885 Pentatricopeptide_repeat 780 809
IPR002885 Pentatricopeptide_repeat 238 263
No external refs found!