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  5. Aop_g14342

Aop_g14342 (EMB2762)


Aliases : EMB2762

Description : SSU processome assembly factor *(NOC4) & original description: none


Gene families : OG0004927 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004927_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g14342
Cluster HCCA: Cluster_283

Target Alias Description ECC score Gene Family Method Actions
Als_g14354 EMB2762 SSU processome assembly factor *(NOC4) & original... 0.03 OrthoFinder output from all 47 species
Cre01.g068377 EMB2762 Protein biosynthesis.cytosolic ribosome.small subunit... 0.02 OrthoFinder output from all 47 species
LOC_Os04g49580.1 EMB2762, LOC_Os04g49580 SSU processome assembly factor (NOC4) 0.03 OrthoFinder output from all 47 species
Mp1g06620.1 EMB2762 SSU processome assembly factor (NOC4) 0.03 OrthoFinder output from all 47 species
Spa_g04301 EMB2762 SSU processome assembly factor *(NOC4) & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR005612 CCAAT-binding_factor 346 527
No external refs found!