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  5. Aop_g14219

Aop_g14219


Description : not classified & original description: none


Gene families : OG0000085 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000085_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g14219

Target Alias Description ECC score Gene Family Method Actions
Adi_g086897 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g07932 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g15037 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g06670 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene30974.t1 Aspi01Gene30974 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0264.g060926 No alias not classified & original description: CDS=282-3104 0.04 OrthoFinder output from all 47 species
Ceric.01G053300.1 Ceric.01G053300 not classified & original description: pacid=50592097... 0.03 OrthoFinder output from all 47 species
Ceric.01G129400.1 Ceric.01G129400 not classified & original description: pacid=50592696... 0.05 OrthoFinder output from all 47 species
LOC_Os11g32270.1 LOC_Os11g32270 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g10339 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g08285 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g11033 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Mp1g14410.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Nbi_g01468 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g12876 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g13338 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0047.g013443 No alias not classified & original description: CDS=271-3063 0.03 OrthoFinder output from all 47 species
Solyc06g068850.4.1 Solyc06g068850 B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 87.4) 0.02 OrthoFinder output from all 47 species
Spa_g20953 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g39901 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g14477 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e025841_P002 Zm00001e025841 B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 116.0) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016779 nucleotidyltransferase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006302 double-strand break repair IEP HCCA
BP GO:0006303 double-strand break repair via nonhomologous end joining IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
InterPro domains Description Start Stop
IPR002934 Polymerase_NTP_transf_dom 560 594
IPR013989 Dev_and_cell_death_domain 28 160
No external refs found!