Aop_g14012


Description : component *(SOP1) of PAXT RNA-exosome-activation complex & original description: none


Gene families : OG0004256 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004256_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g14012

Target Alias Description ECC score Gene Family Method Actions
Adi_g086844 No alias component *(SOP1) of PAXT RNA-exosome-activation complex... 0.03 OrthoFinder output from all 47 species
Ceric.23G086900.1 Ceric.23G086900 component *(SOP1) of PAXT RNA-exosome-activation complex... 0.02 OrthoFinder output from all 47 species
Dcu_g09581 No alias component *(SOP1) of PAXT RNA-exosome-activation complex... 0.05 OrthoFinder output from all 47 species
GSVIVT01008802001 No alias RNA processing.RNA decay.exosome complex.associated... 0.04 OrthoFinder output from all 47 species
Gb_37874 No alias RNA degradation surveillance factor (SOP1) 0.04 OrthoFinder output from all 47 species
LOC_Os06g43120.1 LOC_Os06g43120 RNA degradation surveillance factor (SOP1) 0.03 OrthoFinder output from all 47 species
Lfl_g16590 No alias component *(SOP1) of PAXT RNA-exosome-activation complex... 0.04 OrthoFinder output from all 47 species
Pir_g15166 No alias component *(SOP1) of PAXT RNA-exosome-activation complex... 0.03 OrthoFinder output from all 47 species
Ppi_g15340 No alias component *(SOP1) of PAXT RNA-exosome-activation complex... 0.04 OrthoFinder output from all 47 species
Sam_g49510 No alias component *(SOP1) of PAXT RNA-exosome-activation complex... 0.02 OrthoFinder output from all 47 species
Solyc04g057990.4.1 Solyc04g057990 RNA degradation surveillance factor (SOP1) 0.03 OrthoFinder output from all 47 species
Tin_g16673 No alias component *(SOP1) of PAXT RNA-exosome-activation complex... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0005216 monoatomic ion channel activity IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!