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  5. Aop_g13937

Aop_g13937 (TAF15b)


Aliases : TAF15b

Description : not classified & original description: none


Gene families : OG0003283 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003283_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g13937

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00153p00073330 TAF15b,... Transcription initiation factor TFIID subunit 15b... 0.04 OrthoFinder output from all 47 species
AT5G58470 TAF15b TBP-associated factor 15B 0.04 OrthoFinder output from all 47 species
Dcu_g46266 TAF15b not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os01g07070.2 TAF15b, LOC_Os01g07070 Transcription initiation factor TFIID subunit 15b... 0.04 OrthoFinder output from all 47 species
Len_g23679 TAF15b not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g36395 TAF15b not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10427252g0010 TAF15b Transcription initiation factor TFIID subunit 15b... 0.03 OrthoFinder output from all 47 species
Mp7g03900.1 TAF15b Transcription initiation factor TFIID subunit 15b... 0.02 OrthoFinder output from all 47 species
Pir_g06028 TAF15b not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e016824_P001 TAF15b, Zm00001e016824 Transcription initiation factor TFIID subunit 15b... 0.05 OrthoFinder output from all 47 species
Zm00001e025837_P001 TAF15b, Zm00001e025837 Transcription initiation factor TFIID subunit 15b... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0010257 NADH dehydrogenase complex assembly IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0032981 mitochondrial respiratory chain complex I assembly IEP HCCA
BP GO:0033108 mitochondrial respiratory chain complex assembly IEP HCCA
MF GO:0043167 ion binding IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 341 370
IPR001876 Znf_RanBP2 79 109
No external refs found!