1. Home
  2. Species
  3. Amblovenatum opulentum
  4. Sequence
  5. Aop_g13909

Aop_g13909


Description : substrate adaptor *(RAE1) of SCF E3 ubiquitin ligase complex & original description: none


Gene families : OG0002069 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002069_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g13909
Cluster HCCA: Cluster_52

Target Alias Description ECC score Gene Family Method Actions
AT5G01720 No alias RNI-like superfamily protein 0.04 OrthoFinder output from all 47 species
Gb_24899 No alias F-box/LRR-repeat protein 3 OS=Arabidopsis thaliana... 0.09 OrthoFinder output from all 47 species
Pir_g12548 No alias substrate adaptor *(RAE1) of SCF E3 ubiquitin ligase... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 443 466
IPR001611 Leu-rich_rpt 111 133
IPR001611 Leu-rich_rpt 290 313
IPR001611 Leu-rich_rpt 493 515
IPR001611 Leu-rich_rpt 163 186
IPR001611 Leu-rich_rpt 213 233
IPR001611 Leu-rich_rpt 467 491
IPR001611 Leu-rich_rpt 392 415
IPR001611 Leu-rich_rpt 366 387
IPR001611 Leu-rich_rpt 518 540
IPR001611 Leu-rich_rpt 239 261
No external refs found!