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  5. Aop_g13842

Aop_g13842


Description : Rab GTPase-activating protein & original description: none


Gene families : OG0001869 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001869_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g13842
Cluster HCCA: Cluster_284

Target Alias Description ECC score Gene Family Method Actions
Adi_g009906 No alias Rab GTPase-activating protein & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g22906 No alias Rab GTPase-activating protein & original description: none 0.03 OrthoFinder output from all 47 species
Gb_00844 No alias RAB-GTPase-activating protein (RAB-GAP) 0.02 OrthoFinder output from all 47 species
LOC_Os01g61860.1 LOC_Os01g61860 RAB-GTPase-activating protein (RAB-GAP) 0.05 OrthoFinder output from all 47 species
Ppi_g03980 No alias Rab GTPase-activating protein & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e019374_P002 Zm00001e019374 RAB-GTPase-activating protein (RAB-GAP) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004097 catechol oxidase activity IEP HCCA
MF GO:0004559 alpha-mannosidase activity IEP HCCA
MF GO:0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0015923 mannosidase activity IEP HCCA
MF GO:0015924 mannosyl-oligosaccharide mannosidase activity IEP HCCA
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP HCCA
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
MF GO:0030983 mismatched DNA binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
InterPro domains Description Start Stop
IPR000195 Rab-GTPase-TBC_dom 215 441
No external refs found!