Aop_g13775 (EDD, EDD1)


Aliases : EDD, EDD1

Description : glycine-tRNA ligase & original description: none


Gene families : OG0005277 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005277_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g13775

Target Alias Description ECC score Gene Family Method Actions
Adi_g015460 EDD, EDD1 glycine-tRNA ligase & original description: none 0.08 OrthoFinder output from all 47 species
Ala_g02635 EDD, EDD1 glycine-tRNA ligase & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g13774 EDD, EDD1 glycine-tRNA ligase & original description: none 0.06 OrthoFinder output from all 47 species
Azfi_s0472.g072933 EDD, EDD1 glycine-tRNA ligase & original description: CDS=154-3516 0.07 OrthoFinder output from all 47 species
Ceric.32G004800.1 EDD, EDD1,... glycine-tRNA ligase & original description:... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001466.1 EDD, EDD1 Glycine--tRNA ligase, chloroplastic/mitochondrial 2... 0.02 OrthoFinder output from all 47 species
Cre10.g433000 EDD, EDD1 Protein biosynthesis.aminoacyl-tRNA synthetase... 0.02 OrthoFinder output from all 47 species
Dde_g21151 EDD, EDD1 glycine-tRNA ligase & original description: none 0.05 OrthoFinder output from all 47 species
LOC_Os06g01400.1 EDD, EDD1, LOC_Os06g01400 glycine-tRNA ligase 0.04 OrthoFinder output from all 47 species
Lfl_g11421 EDD, EDD1 glycine-tRNA ligase & original description: none 0.03 OrthoFinder output from all 47 species
MA_69123g0010 EDD, EDD1 Glycine--tRNA ligase, chloroplastic/mitochondrial 2... 0.01 OrthoFinder output from all 47 species
Mp8g04520.1 EDD, EDD1 glycine-tRNA ligase 0.03 OrthoFinder output from all 47 species
Msp_g13173 EDD, EDD1 glycine-tRNA ligase & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g18283 EDD, EDD1 glycine-tRNA ligase & original description: none 0.08 OrthoFinder output from all 47 species
Ore_g28161 EDD, EDD1 glycine-tRNA ligase & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g14304 EDD, EDD1 glycine-tRNA ligase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g49402 EDD, EDD1 glycine-tRNA ligase & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0050.g013857 EDD, EDD1 EC_1.14 oxidoreductase acting on paired donor with... 0.03 OrthoFinder output from all 47 species
Sam_g25103 No alias glycine-tRNA ligase & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g17234 EDD, EDD1 glycine-tRNA ligase & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEA Interproscan
MF GO:0004820 glycine-tRNA ligase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0005737 cytoplasm IEA Interproscan
BP GO:0006426 glycyl-tRNA aminoacylation IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0015969 guanosine tetraphosphate metabolic process IEP HCCA
BP GO:0017038 protein import IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0033865 nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
InterPro domains Description Start Stop
IPR002310 Gly-tRNA_ligase_asu 115 392
IPR015944 Gly-tRNA-synth_bsu 427 973
No external refs found!