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  5. Aop_g13660

Aop_g13660


Description : not classified & original description: none


Gene families : OG0019845 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0019845_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g13660
Cluster HCCA: Cluster_269

Target Alias Description ECC score Gene Family Method Actions
Aop_g14359 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g68115 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g12037 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g19081 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g16094 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006766 vitamin metabolic process IEP HCCA
BP GO:0006767 water-soluble vitamin metabolic process IEP HCCA
BP GO:0006771 riboflavin metabolic process IEP HCCA
MF GO:0008531 riboflavin kinase activity IEP HCCA
BP GO:0009110 vitamin biosynthetic process IEP HCCA
BP GO:0009231 riboflavin biosynthetic process IEP HCCA
BP GO:0042364 water-soluble vitamin biosynthetic process IEP HCCA
BP GO:0042726 flavin-containing compound metabolic process IEP HCCA
BP GO:0042727 flavin-containing compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 22 68
IPR002885 Pentatricopeptide_repeat 123 171
IPR002885 Pentatricopeptide_repeat 2 18
IPR002885 Pentatricopeptide_repeat 201 224
IPR032867 DYW_dom 344 431
IPR046849 Eplus_motif 310 330
No external refs found!