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  5. Aop_g13559

Aop_g13559


Description : not classified & original description: none


Gene families : OG0000402 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000402_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g13559
Cluster HCCA: Cluster_328

Target Alias Description ECC score Gene Family Method Actions
AT4G14920 No alias Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc... 0.03 OrthoFinder output from all 47 species
Adi_g020053 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g13062 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g16047 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g20182 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g23025 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g07565 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene25981.t1 Aspi01Gene25981 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0519.g075228 No alias not classified & original description: CDS=211-3699 0.03 OrthoFinder output from all 47 species
Cba_g16245 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g31776 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.04G075300.1 Ceric.04G075300 not classified & original description: pacid=50631416... 0.05 OrthoFinder output from all 47 species
Ceric.35G031200.1 Ceric.35G031200 not classified & original description: pacid=50581090... 0.03 OrthoFinder output from all 47 species
Cre06.g296950 No alias RNA biosynthesis.transcriptional activation.PHD finger... 0.01 OrthoFinder output from all 47 species
Cre08.g386000 No alias No description available 0.01 OrthoFinder output from all 47 species
Dcu_g09002 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g16965 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g50149 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g08961 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01014219001 No alias RNA biosynthesis.transcriptional activation.PHD finger... 0.04 OrthoFinder output from all 47 species
GSVIVT01017972001 No alias RNA biosynthesis.transcriptional activation.PHD finger... 0.05 OrthoFinder output from all 47 species
Gb_06644 No alias component IDM1 of ROS1-recruitment complex. PHD finger... 0.04 OrthoFinder output from all 47 species
LOC_Os07g07690.1 LOC_Os07g07690 PHD finger transcription factor 0.03 OrthoFinder output from all 47 species
Len_g12071 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g47387 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g50209 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g06765 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_139275g0010 No alias PHD finger transcription factor 0.05 OrthoFinder output from all 47 species
MA_14500g0010 No alias component IDM1 of ROS1-recruitment complex. PHD finger... 0.06 OrthoFinder output from all 47 species
Mp6g21090.2 No alias PHD finger transcription factor 0.02 OrthoFinder output from all 47 species
Nbi_g13767 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g18818 No alias component *(IDM1) of ROS1-recruitment complex & original... 0.05 OrthoFinder output from all 47 species
Pir_g06867 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g18645 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Pir_g65007 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g08147 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0009.g004313 No alias not classified & original description: CDS=588-5219 0.03 OrthoFinder output from all 47 species
Sam_g15944 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g16192 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo80470 No alias RNA biosynthesis.transcriptional activation.PHD finger... 0.02 OrthoFinder output from all 47 species
Solyc06g082040.2.1 Solyc06g082040 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc09g076010.3.1 Solyc09g076010 PHD finger transcription factor 0.03 OrthoFinder output from all 47 species
Spa_g04858 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g21891 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g50990 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g21039 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Zm00001e005667_P001 Zm00001e005667 PHD finger transcription factor 0.08 OrthoFinder output from all 47 species
Zm00001e012046_P003 Zm00001e012046 PHD finger transcription factor 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0042393 histone binding IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
InterPro domains Description Start Stop
IPR008395 Agenet-like_dom 18 102
IPR032308 TDBD 726 777
No external refs found!