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  5. Aop_g13536

Aop_g13536


Description : not classified & original description: none


Gene families : OG0012426 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0012426_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g13536
Cluster HCCA: Cluster_327

Target Alias Description ECC score Gene Family Method Actions
Ala_g08068 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.35G008600.1 Ceric.35G008600 not classified & original description: pacid=50581636... 0.04 OrthoFinder output from all 47 species
Dde_g18433 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g21429 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g07126 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g08277 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Tin_g27512 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 305 352
IPR002885 Pentatricopeptide_repeat 505 553
IPR002885 Pentatricopeptide_repeat 105 133
IPR002885 Pentatricopeptide_repeat 381 402
IPR002885 Pentatricopeptide_repeat 206 235
IPR002885 Pentatricopeptide_repeat 408 438
IPR002885 Pentatricopeptide_repeat 178 205
IPR002885 Pentatricopeptide_repeat 644 672
IPR002885 Pentatricopeptide_repeat 609 638
IPR002885 Pentatricopeptide_repeat 279 304
No external refs found!