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  5. Aop_g13435

Aop_g13435 (AtMYB20, MYB20)


Aliases : AtMYB20, MYB20

Description : MYB class-R2R3 transcription factor & original description: none


Gene families : OG0000015 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g13435

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00033p00200970 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 OrthoFinder output from all 47 species
AMTR_s00037p00177500 ATMYB101,... RNA biosynthesis.transcriptional activation.MYB... 0.02 OrthoFinder output from all 47 species
AT3G08500 AtMYB83, MYB83 myb domain protein 83 0.02 OrthoFinder output from all 47 species
AT5G14340 AtMYB40, MYB40 myb domain protein 40 0.02 OrthoFinder output from all 47 species
AT5G62470 MYBCOV1, MYB96, ATMYB96 myb domain protein 96 0.02 OrthoFinder output from all 47 species
Ceric.13G080700.1 ATMYB120,... MYB class-R2R3 subgroup-18 transcription factor &... 0.03 OrthoFinder output from all 47 species
Dac_g36431 AtMYB50, MYB50 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g39749 AtMYB40, MYB40 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_29789 MYB84, RAX3, ATMYB84 transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
LOC_Os05g35500.1 MYB6, AtMYB6,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
LOC_Os05g46610.1 MYB86, ATMYB86,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Pir_g33295 AtMYB17, MYB17 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g18519 AtMYB85, MYB85 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc07g052300.3.1 ATMYB101,... transcription factor (MYB) 0.04 OrthoFinder output from all 47 species
Zm00001e008489_P001 MYB36, AtMYB36,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Zm00001e011944_P001 MYB84, RAX3,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Zm00001e034214_P001 MYB36, AtMYB36,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Zm00001e034807_P001 AtMYB42, MYB42,... transcription factor (MYB) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005991 trehalose metabolic process IEP HCCA
BP GO:0005992 trehalose biosynthetic process IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0046351 disaccharide biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001005 SANT/Myb 68 110
IPR001005 SANT/Myb 14 61
No external refs found!