Aop_g13396


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g13396

Target Alias Description ECC score Gene Family Method Actions
Aop_g16830 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g17445 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g28216 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.02G054700.1 Ceric.02G054700 not classified & original description: pacid=50584211... 0.03 OrthoFinder output from all 47 species
Ceric.10G029900.1 Ceric.10G029900 not classified & original description: pacid=50612941... 0.04 OrthoFinder output from all 47 species
Ceric.15G074900.1 Ceric.15G074900 not classified & original description: pacid=50640124... 0.03 OrthoFinder output from all 47 species
Ceric.28G051100.1 Ceric.28G051100 not classified & original description: pacid=50570532... 0.03 OrthoFinder output from all 47 species
Dac_g10962 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g19016 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g19096 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g28151 VAC1, ECB2, ATECB2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g11341 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g17712 OTP84 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g02728 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g02847 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g12988 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g13009 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g13563 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g18006 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g57079 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57368 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g57950 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g60422 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g23985 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g24048 CRR2 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g25320 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g53142 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g57155 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g35636 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g35670 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g43833 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 450 469
IPR002885 Pentatricopeptide_repeat 550 571
IPR002885 Pentatricopeptide_repeat 247 267
IPR002885 Pentatricopeptide_repeat 146 171
IPR002885 Pentatricopeptide_repeat 753 777
IPR002885 Pentatricopeptide_repeat 680 709
IPR046848 E_motif 794 856
IPR002885 Pentatricopeptide_repeat 172 220
IPR002885 Pentatricopeptide_repeat 69 119
IPR002885 Pentatricopeptide_repeat 577 622
IPR002885 Pentatricopeptide_repeat 272 319
IPR002885 Pentatricopeptide_repeat 475 521
IPR002885 Pentatricopeptide_repeat 374 420
No external refs found!