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  5. Aop_g13378

Aop_g13378 (VAC1, ECB2, ATECB2)


Aliases : VAC1, ECB2, ATECB2

Description : not classified & original description: none


Gene families : OG0012792 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0012792_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g13378
Cluster HCCA: Cluster_327

Target Alias Description ECC score Gene Family Method Actions
Als_g05092 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.03G005000.1 VAC1, ECB2,... not classified & original description: pacid=50573189... 0.03 OrthoFinder output from all 47 species
Dac_g02357 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g05958 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g12974 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g39486 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 522 566
IPR002885 Pentatricopeptide_repeat 83 132
IPR002885 Pentatricopeptide_repeat 184 231
IPR002885 Pentatricopeptide_repeat 286 333
IPR002885 Pentatricopeptide_repeat 587 618
IPR002885 Pentatricopeptide_repeat 424 454
IPR002885 Pentatricopeptide_repeat 390 419
IPR002885 Pentatricopeptide_repeat 361 384
No external refs found!