Aop_g13293 (CHR24)

Aliases : CHR24

Description : chromatin remodeling factor *(ERCC6) & original description: none

Gene families : OG0005354 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005354_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aop_g13293
Cluster	HCCA: Cluster_18

Target	Alias	Description	ECC score	Gene Family Method
Ceric.22G065600.1	CHR24, Ceric.22G065600	not classified & original description: pacid=50613904...	0.02	OrthoFinder output from all 47 species
LOC_Os04g59620.1	CHR24, LOC_Os04g59620	chromatin remodeling factor (ERCC6)	0.02	OrthoFinder output from all 47 species
Lfl_g19269	CHR24	chromatin remodeling factor *(ERCC6) & original description: none	0.03	OrthoFinder output from all 47 species
MA_18372g0010	CHR24	Protein CHROMATIN REMODELING 24 OS=Arabidopsis thaliana...	0.02	OrthoFinder output from all 47 species
Mp1g29760.1	CHR24	chromatin remodeling factor (ERCC6)	0.02	OrthoFinder output from all 47 species
Nbi_g03168	CHR24	chromatin remodeling factor *(ERCC6) & original description: none	0.03	OrthoFinder output from all 47 species
Solyc01g068280.3.1	CHR24, Solyc01g068280	chromatin remodeling factor (ERCC6)	0.02	OrthoFinder output from all 47 species
Spa_g24729	CHR24	chromatin remodeling factor *(ERCC6) & original description: none	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0008094	ATP-dependent activity, acting on DNA	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140097	catalytic activity, acting on DNA	None	Extended
MF	GO:0140640	catalytic activity, acting on a nucleic acid	None	Extended
MF	GO:0140657	ATP-dependent activity	None	Extended
MF	GO:0140658	ATP-dependent chromatin remodeler activity	IEA	Interproscan
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001650	Helicase_C	623	735
IPR000330	SNF2_N	279	571

External Links

No external refs found!