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  5. Aop_g13243

Aop_g13243


Description : not classified & original description: none


Gene families : OG0001680 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001680_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g13243
Cluster HCCA: Cluster_42

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00070p00103330 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT1G34320 No alias Protein of unknown function (DUF668) 0.02 OrthoFinder output from all 47 species
Als_g01916 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.05G002200.1 Ceric.05G002200 not classified & original description: pacid=50578529... 0.03 OrthoFinder output from all 47 species
Ehy_g16313 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os01g65330.1 LOC_Os01g65330 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os06g50220.1 LOC_Os06g50220 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Lfl_g02272 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0186.g025065 No alias not classified & original description: CDS=638-2614 0.03 OrthoFinder output from all 47 species
Sam_g26068 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Solyc04g081510.4.1 Solyc04g081510 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc06g065460.2.1 Solyc06g065460 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc11g017000.2.1 Solyc11g017000 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e014795_P002 Zm00001e014795 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e027001_P003 Zm00001e027001 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e030171_P001 Zm00001e030171 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0045927 positive regulation of growth IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP HCCA
MF GO:0004649 poly(ADP-ribose) glycohydrolase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006282 regulation of DNA repair IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016763 pentosyltransferase activity IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0034061 DNA polymerase activity IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
BP GO:0051052 regulation of DNA metabolic process IEP HCCA
BP GO:0080134 regulation of response to stress IEP HCCA
BP GO:0080135 regulation of cellular response to stress IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
BP GO:2001020 regulation of response to DNA damage stimulus IEP HCCA
InterPro domains Description Start Stop
IPR021864 DUF3475 137 193
IPR007700 DUF668 360 445
No external refs found!