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  5. Aop_g13170

Aop_g13170 (EIF2, AteIF3f, eIF3F)


Aliases : EIF2, AteIF3f, eIF3F

Description : component *(eIF3f) of eIF3 mRNA-to-PIC binding complex & original description: none


Gene families : OG0004531 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004531_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g13170

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00077p00121720 EIF2, AteIF3f,... Protein biosynthesis.translation... 0.02 OrthoFinder output from all 47 species
Azfi_s0754.g085338 EIF2, AteIF3f, eIF3F component *(eIF3f) of eIF3 mRNA-to-PIC binding complex &... 0.04 OrthoFinder output from all 47 species
Cba_g09867 EIF2, AteIF3f, eIF3F component *(eIF3f) of eIF3 mRNA-to-PIC binding complex &... 0.03 OrthoFinder output from all 47 species
Ceric.19G025600.1 EIF2, AteIF3f,... component *(eIF3f) of eIF3 mRNA-to-PIC binding complex &... 0.03 OrthoFinder output from all 47 species
Dcu_g43958 EIF2, AteIF3f, eIF3F component *(eIF3f) of eIF3 mRNA-to-PIC binding complex &... 0.05 OrthoFinder output from all 47 species
Ehy_g19884 EIF2, AteIF3f, eIF3F component *(eIF3f) of eIF3 mRNA-to-PIC binding complex &... 0.03 OrthoFinder output from all 47 species
Gb_36251 EIF2, AteIF3f, eIF3F component eIF3f of eIF3 mRNA-to-PIC binding complex 0.06 OrthoFinder output from all 47 species
LOC_Os05g01450.1 EIF2, AteIF3f,... component eIF3f of eIF3 mRNA-to-PIC binding complex 0.04 OrthoFinder output from all 47 species
Lfl_g01078 EIF2, AteIF3f, eIF3F component *(eIF3f) of eIF3 mRNA-to-PIC binding complex &... 0.03 OrthoFinder output from all 47 species
Mp5g18020.1 EIF2, AteIF3f, eIF3F component eIF3f of eIF3 mRNA-to-PIC binding complex 0.08 OrthoFinder output from all 47 species
Nbi_g04161 EIF2, AteIF3f, eIF3F component *(eIF3f) of eIF3 mRNA-to-PIC binding complex &... 0.02 OrthoFinder output from all 47 species
Solyc11g013440.2.1 EIF2, AteIF3f,... component eIF3f of eIF3 mRNA-to-PIC binding complex 0.02 OrthoFinder output from all 47 species
Spa_g09311 EIF2, AteIF3f, eIF3F component *(eIF3f) of eIF3 mRNA-to-PIC binding complex &... 0.03 OrthoFinder output from all 47 species
Zm00001e027674_P001 EIF2, AteIF3f,... component eIF3f of eIF3 mRNA-to-PIC binding complex 0.03 OrthoFinder output from all 47 species
Zm00001e029699_P001 EIF2, AteIF3f,... component eIF3f of eIF3 mRNA-to-PIC binding complex 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
MF GO:0008233 peptidase activity IEA Interproscan
MF GO:0008237 metallopeptidase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0003746 translation elongation factor activity IEP HCCA
MF GO:0004590 orotidine-5'-phosphate decarboxylase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005743 mitochondrial inner membrane IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006206 pyrimidine nucleobase metabolic process IEP HCCA
BP GO:0006207 'de novo' pyrimidine nucleobase biosynthetic process IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006417 regulation of translation IEP HCCA
BP GO:0006448 regulation of translational elongation IEP HCCA
BP GO:0006449 regulation of translational termination IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009112 nucleobase metabolic process IEP HCCA
BP GO:0009891 positive regulation of biosynthetic process IEP HCCA
BP GO:0009893 positive regulation of metabolic process IEP HCCA
BP GO:0010557 positive regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0010604 positive regulation of macromolecule metabolic process IEP HCCA
BP GO:0010608 post-transcriptional regulation of gene expression IEP HCCA
BP GO:0010628 positive regulation of gene expression IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
BP GO:0019856 pyrimidine nucleobase biosynthetic process IEP HCCA
CC GO:0019866 organelle inner membrane IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
BP GO:0031325 positive regulation of cellular metabolic process IEP HCCA
BP GO:0031328 positive regulation of cellular biosynthetic process IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
BP GO:0034248 regulation of amide metabolic process IEP HCCA
BP GO:0034250 positive regulation of amide metabolic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
MF GO:0043021 ribonucleoprotein complex binding IEP HCCA
MF GO:0043022 ribosome binding IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043243 positive regulation of protein-containing complex disassembly IEP HCCA
BP GO:0043244 regulation of protein-containing complex disassembly IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA
BP GO:0045727 positive regulation of translation IEP HCCA
BP GO:0045901 positive regulation of translational elongation IEP HCCA
BP GO:0045905 positive regulation of translational termination IEP HCCA
BP GO:0046112 nucleobase biosynthetic process IEP HCCA
BP GO:0048518 positive regulation of biological process IEP HCCA
BP GO:0048522 positive regulation of cellular process IEP HCCA
BP GO:0051128 regulation of cellular component organization IEP HCCA
BP GO:0051130 positive regulation of cellular component organization IEP HCCA
BP GO:0051173 positive regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051246 regulation of protein metabolic process IEP HCCA
BP GO:0051247 positive regulation of protein metabolic process IEP HCCA
CC GO:0061617 MICOS complex IEP HCCA
BP GO:0072527 pyrimidine-containing compound metabolic process IEP HCCA
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP HCCA
CC GO:0098798 mitochondrial protein-containing complex IEP HCCA
CC GO:0098800 inner mitochondrial membrane protein complex IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000555 JAMM/MPN+_dom 18 122
IPR024969 Rpn11/EIF3F_C 171 277
No external refs found!