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  5. Aop_g13144

Aop_g13144


Description : not classified & original description: none


Gene families : OG0001647 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001647_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g13144

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00014p00239440 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AMTR_s00045p00055640 evm_27.TU.AmTr_v1... No description available 0.06 OrthoFinder output from all 47 species
AMTR_s00096p00034760 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AMTR_s00154p00013870 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT1G11915 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.02 OrthoFinder output from all 47 species
AT5G50290 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.03 OrthoFinder output from all 47 species
Aop_g09649 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g01835 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.01G065700.1 Ceric.01G065700 not classified & original description: pacid=50591366... 0.03 OrthoFinder output from all 47 species
Dcu_g00903 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g03653 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01012680001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01017668001 No alias No description available 0.03 OrthoFinder output from all 47 species
Gb_00323 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os06g25950.1 LOC_Os06g25950 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_10436612g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g04643 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g31760 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g18642 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g25022 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g02716 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g62686 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ppi_g63132 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0023.g008851 No alias not classified & original description: CDS=1-1029 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0101.g019806 No alias not classified & original description: CDS=16-978 0.04 OrthoFinder output from all 47 species
Sam_g13940 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g27396 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g56941 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e002364_P001 Zm00001e002364 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0030247 polysaccharide binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
CC GO:0000808 origin recognition complex IEP HCCA
MF GO:0003968 RNA-dependent RNA polymerase activity IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005664 nuclear origin of replication recognition complex IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006952 defense response IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR025287 WAK_GUB 29 88
No external refs found!