Aop_g12978

Description : not classified & original description: none

Gene families : OG0000163 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000163_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aop_g12978
Cluster	HCCA: Cluster_308

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00014p00111720	evm_27.TU.AmTr_v1...	AAA-ATPase At3g50940 OS=Arabidopsis thaliana	0.01	OrthoFinder output from all 47 species
AMTR_s00014p00241930	BCS1,...	Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
AT2G18193	No alias	P-loop containing nucleoside triphosphate hydrolases...	0.02	OrthoFinder output from all 47 species
AT3G28520	No alias	P-loop containing nucleoside triphosphate hydrolases...	0.02	OrthoFinder output from all 47 species
Azfi_s0059.g034525	No alias	not classified & original description: CDS=1-2166	0.02	OrthoFinder output from all 47 species
GSVIVT01023336001	No alias	AAA-ATPase At3g28600 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
GSVIVT01027397001	No alias	AAA-ATPase At2g46620 OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
GSVIVT01029202001	No alias	AAA-ATPase At5g57480 OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
LOC_Os01g19260.1	AATP1, LOC_Os01g19260	AAA-ATPase At3g28580 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
LOC_Os01g40140.1	LOC_Os01g40140	AAA-ATPase At3g50940 OS=Arabidopsis thaliana...	0.02	OrthoFinder output from all 47 species
LOC_Os03g02330.1	LOC_Os03g02330	AAA-ATPase At2g46620 OS=Arabidopsis thaliana...	0.02	OrthoFinder output from all 47 species
LOC_Os12g28137.1	AATP1, LOC_Os12g28137	AAA-ATPase At3g28580 OS=Arabidopsis thaliana...	0.02	OrthoFinder output from all 47 species
LOC_Os12g28177.1	AATP1, LOC_Os12g28177	AAA-ATPase At3g28580 OS=Arabidopsis thaliana...	0.02	OrthoFinder output from all 47 species
LOC_Os12g28590.1	AATP1, LOC_Os12g28590	AAA-ATPase At3g28580 OS=Arabidopsis thaliana...	0.02	OrthoFinder output from all 47 species
LOC_Os12g44190.1	AATP1, LOC_Os12g44190	AAA-ATPase ASD, mitochondrial OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
MA_7834209g0010	No alias	AAA-ATPase At3g28600 OS=Arabidopsis thaliana...	0.01	OrthoFinder output from all 47 species
Mp7g18570.1	No alias	AAA-ATPase At4g25835 OS=Arabidopsis thaliana...	0.02	OrthoFinder output from all 47 species
Msp_g14679	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g63892	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Smo422466	No alias	AAA-ATPase At4g25835 OS=Arabidopsis thaliana	0.01	OrthoFinder output from all 47 species
Solyc02g062550.3.1	BCS1, Solyc02g062550	Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Solyc10g007280.4.1	BCS1, Solyc10g007280	Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Zm00001e027961_P001	Zm00001e027961	AAA-ATPase At3g50940 OS=Arabidopsis thaliana...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATP hydrolysis activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0008171	O-methyltransferase activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003959	ATPase_AAA_core	42	103

External Links

No external refs found!

Aop_g12978

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation