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Aliases : MYB88, AtMYB88
Description : MYB class-R2R3 transcription factor & original description: none
Gene families : OG0000080 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000080_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Aop_g12966 | |
| Cluster | HCCA: Cluster_18 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00009p00263240 | MYB3R-1,... | RNA biosynthesis.transcriptional activation.MYB... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00010p00252990 | AtMYB124,... | RNA biosynthesis.transcriptional activation.MYB... | 0.06 | OrthoFinder output from all 47 species | |
| AMTR_s00109p00061950 | MYB3R-1,... | RNA biosynthesis.transcriptional activation.MYB... | 0.12 | OrthoFinder output from all 47 species | |
| AT1G17950 | BW52, ATMYB52, MYB52 | myb domain protein 52 | 0.02 | OrthoFinder output from all 47 species | |
| AT2G39880 | AtMYB25, MYB25 | myb domain protein 25 | 0.03 | OrthoFinder output from all 47 species | |
| AT4G00540 | ATMYB3R2,... | myb domain protein 3r2 | 0.02 | OrthoFinder output from all 47 species | |
| AT4G33450 | ATMYB69, MYB69 | myb domain protein 69 | 0.02 | OrthoFinder output from all 47 species | |
| AT5G11510 | AtMYB3R4, MYB3R-4 | myb domain protein 3r-4 | 0.06 | OrthoFinder output from all 47 species | |
| AT5G39700 | MYB89, AtMYB89 | myb domain protein 89 | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g083870 | ATMYB3R5, MYB3R-5 | R1R2R3-MYB transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aev_g39348 | MYB3R-1,... | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g14702 | AtMYB124, MYB124, FLP | MYB class-R2R3 transcription factor & original description: none | 0.18 | OrthoFinder output from all 47 species | |
| Als_g15721 | LOF2, MYB105, ATMYB105 | MYB class-R2R3 subgroup-21 transcription factor &... | 0.03 | OrthoFinder output from all 47 species | |
| Als_g27407 | ATMYB3R5, MYB3R-5 | R1R2R3-MYB transcription factor & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Als_g57490 | MYB3R-3, AtMYB3R3 | R1R2R3-MYB transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene32034.t1 | AtMYB124,... | MYB class-R2R3 transcription factor & original description: none | 0.11 | OrthoFinder output from all 47 species | |
| Aspi01Gene47785.t1 | MYB3R-1,... | R1R2R3-MYB transcription factor & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Azfi_s0179.g056258 | MYB3R-1,... | R1R2R3-MYB transcription factor & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g15859 | MYBR1, MYB44,... | MYB class-R2R3 subgroup-22/23 transcription factor &... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.13G051800.1 | MYB88, AtMYB88,... | MYB class-R2R3 transcription factor & original... | 0.1 | OrthoFinder output from all 47 species | |
| Ceric.33G050100.1 | MYB3R-1,... | R1R2R3-MYB transcription factor & original description:... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.39G017100.1 | MYB88, AtMYB88,... | MYB class-R2R3 transcription factor & original... | 0.2 | OrthoFinder output from all 47 species | |
| Cre07.g345350 | MYBR1, MYB44,... | RNA biosynthesis.transcriptional activation.MYB... | 0.01 | OrthoFinder output from all 47 species | |
| Dac_g04675 | AtMYB124, MYB124, FLP | MYB class-R2R3 transcription factor & original description: none | 0.11 | OrthoFinder output from all 47 species | |
| Dcu_g12641 | MYB3R-1,... | R1R2R3-MYB transcription factor & original description: none | 0.16 | OrthoFinder output from all 47 species | |
| GSVIVT01010006001 | BW52, ATMYB52, MYB52 | RNA biosynthesis.transcriptional activation.MYB... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01034171001 | MYB3R-3, AtMYB3R3 | RNA biosynthesis.transcriptional activation.MYB... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01035663001 | MYB3R-1,... | RNA biosynthesis.transcriptional activation.MYB... | 0.08 | OrthoFinder output from all 47 species | |
| LOC_Os01g12860.1 | MYB3R-1,... | transcription factor (MYB) | 0.12 | OrthoFinder output from all 47 species | |
| LOC_Os03g51110.1 | BW52, ATMYB52,... | transcription factor (MYB) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os12g13570.1 | MYB3R-1,... | transcription factor (MYB) | 0.09 | OrthoFinder output from all 47 species | |
| Len_g16435 | ATMYB3R5, MYB3R-5 | R1R2R3-MYB transcription factor & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Len_g27982 | MYB3R-1,... | R1R2R3-MYB transcription factor & original description: none | 0.13 | OrthoFinder output from all 47 species | |
| Len_g56915 | MYB88, AtMYB88 | MYB class-R2R3 transcription factor & original description: none | 0.17 | OrthoFinder output from all 47 species | |
| Lfl_g18053 | MYB3R-1,... | R1R2R3-MYB transcription factor & original description: none | 0.1 | OrthoFinder output from all 47 species | |
| Lfl_g28837 | MYB3R-1,... | R1R2R3-MYB transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| MA_605711g0010 | No alias | Transcription factor MYB3R-4 OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species | |
| MA_89624g0010 | LOF2, MYB105, ATMYB105 | transcription factor (MYB) | 0.03 | OrthoFinder output from all 47 species | |
| Mp1g08640.1 | MYB3R-1,... | transcription factor (MYB) | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g44400 | AtMYB124, MYB124, FLP | MYB class-R2R3 transcription factor & original description: none | 0.17 | OrthoFinder output from all 47 species | |
| Nbi_g02270 | AtMYB124, MYB124, FLP | MYB class-R2R3 transcription factor & original description: none | 0.2 | OrthoFinder output from all 47 species | |
| Nbi_g10936 | MYB3R-1,... | R1R2R3-MYB transcription factor & original description: none | 0.13 | OrthoFinder output from all 47 species | |
| Nbi_g24734 | LOF2, MYB105, ATMYB105 | MYB class-R2R3 subgroup-21 transcription factor &... | 0.02 | OrthoFinder output from all 47 species | |
| Pp3c17_19947V3.1 | AtMYB124,... | myb domain protein 88 | 0.01 | OrthoFinder output from all 47 species | |
| Ppi_g02322 | MYB3R-1,... | R1R2R3-MYB transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g08219 | MYB3R-1,... | R1R2R3-MYB transcription factor & original description: none | 0.09 | OrthoFinder output from all 47 species | |
| Ppi_g12915 | AtMYB124, MYB124, FLP | MYB class-R2R3 transcription factor & original description: none | 0.1 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0063.g015735 | MYB3R-1,... | R1R2R3-MYB transcription factor & original description:... | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0272.g027032 | AtMYB124, MYB124, FLP | MYB class-R2R3 transcription factor & original... | 0.1 | OrthoFinder output from all 47 species | |
| Solyc03g098270.1.1 | LOF2, MYB105,... | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc04g064540.4.1 | BW52, ATMYB52,... | transcription factor (MYB) | 0.01 | OrthoFinder output from all 47 species | |
| Solyc08g068320.3.1 | MYB3R-1,... | transcription factor (MYB) | 0.02 | OrthoFinder output from all 47 species | |
| Solyc08g080580.4.1 | MYB3R-1,... | transcription factor (MYB) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc11g071300.2.1 | MYB3R-1,... | transcription factor (MYB) | 0.08 | OrthoFinder output from all 47 species | |
| Spa_g39449 | AtMYB124, MYB124, FLP | MYB class-R2R3 transcription factor & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Tin_g12262 | MYB3R-1,... | R1R2R3-MYB transcription factor & original description: none | 0.17 | OrthoFinder output from all 47 species | |
| Tin_g13864 | AtMYB124, MYB124, FLP | MYB class-R2R3 transcription factor & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Zm00001e005507_P001 | BW52, ATMYB52,... | transcription factor (MYB) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e031356_P001 | MYB3R-1,... | transcription factor (MYB) | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003774 | cytoskeletal motor activity | IEP | HCCA |
| MF | GO:0003777 | microtubule motor activity | IEP | HCCA |
| MF | GO:0005515 | protein binding | IEP | HCCA |
| CC | GO:0005634 | nucleus | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006259 | DNA metabolic process | IEP | HCCA |
| BP | GO:0006260 | DNA replication | IEP | HCCA |
| BP | GO:0006270 | DNA replication initiation | IEP | HCCA |
| BP | GO:0006275 | regulation of DNA replication | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0006820 | monoatomic anion transport | IEP | HCCA |
| BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | HCCA |
| BP | GO:0007017 | microtubule-based process | IEP | HCCA |
| BP | GO:0007018 | microtubule-based movement | IEP | HCCA |
| MF | GO:0008017 | microtubule binding | IEP | HCCA |
| MF | GO:0008094 | ATP-dependent activity, acting on DNA | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| BP | GO:0008156 | negative regulation of DNA replication | IEP | HCCA |
| BP | GO:0009892 | negative regulation of metabolic process | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| BP | GO:0010605 | negative regulation of macromolecule metabolic process | IEP | HCCA |
| MF | GO:0015631 | tubulin binding | IEP | HCCA |
| BP | GO:0031324 | negative regulation of cellular metabolic process | IEP | HCCA |
| BP | GO:0033554 | cellular response to stress | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| CC | GO:0043227 | membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
| BP | GO:0045005 | DNA-templated DNA replication maintenance of fidelity | IEP | HCCA |
| BP | GO:0045934 | negative regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| BP | GO:0048478 | replication fork protection | IEP | HCCA |
| BP | GO:0048519 | negative regulation of biological process | IEP | HCCA |
| BP | GO:0048523 | negative regulation of cellular process | IEP | HCCA |
| BP | GO:0051052 | regulation of DNA metabolic process | IEP | HCCA |
| BP | GO:0051053 | negative regulation of DNA metabolic process | IEP | HCCA |
| BP | GO:0051172 | negative regulation of nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0051716 | cellular response to stimulus | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| BP | GO:0090329 | regulation of DNA-templated DNA replication | IEP | HCCA |
| MF | GO:0140097 | catalytic activity, acting on DNA | IEP | HCCA |
| MF | GO:0140657 | ATP-dependent activity | IEP | HCCA |
| MF | GO:0140658 | ATP-dependent chromatin remodeler activity | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
| BP | GO:2000104 | negative regulation of DNA-templated DNA replication | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |