Aop_g12947


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g12947

Target Alias Description ECC score Gene Family Method Actions
Adi_g003303 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g004476 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g069053 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g07631 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ala_g12445 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g17237 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g17652 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g23793 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g26222 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g28308 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g31160 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g33998 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g36188 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g36544 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g37466 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g39266 MEF19 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05908 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18766 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g18971 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g32345 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g55326 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g09079 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g22677 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27006 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27610 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27904 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g37980 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene04397.t1 Aspi01Gene04397 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene43974.t1 REME1, Aspi01Gene43974 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene69580.t1 Aspi01Gene69580 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0022.g016204 OTP84 not classified & original description: CDS=27-2648 0.04 OrthoFinder output from all 47 species
Azfi_s0059.g034665 CRR22 not classified & original description: CDS=1-2190 0.04 OrthoFinder output from all 47 species
Azfi_s0082.g038719 No alias not classified & original description: CDS=1-2307 0.03 OrthoFinder output from all 47 species
Azfi_s0191.g056992 No alias not classified & original description: CDS=1-2262 0.04 OrthoFinder output from all 47 species
Azfi_s0197.g057356 No alias not classified & original description: CDS=1-2922 0.03 OrthoFinder output from all 47 species
Cba_g02715 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g10344 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20751 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g29381 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.05G079500.1 Ceric.05G079500 not classified & original description: pacid=50579193... 0.03 OrthoFinder output from all 47 species
Ceric.10G007000.1 Ceric.10G007000 not classified & original description: pacid=50613077... 0.03 OrthoFinder output from all 47 species
Ceric.10G013000.1 EMB2758, Ceric.10G013000 not classified & original description: pacid=50613337... 0.03 OrthoFinder output from all 47 species
Ceric.11G026900.1 Ceric.11G026900 not classified & original description: pacid=50595788... 0.03 OrthoFinder output from all 47 species
Ceric.13G057100.1 Ceric.13G057100 not classified & original description: pacid=50635531... 0.03 OrthoFinder output from all 47 species
Ceric.23G083100.1 Ceric.23G083100 ssDNA-binding protein *(OSB) & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.27G067100.1 CRR22, Ceric.27G067100 not classified & original description: pacid=50605115... 0.03 OrthoFinder output from all 47 species
Ceric.30G024700.1 Ceric.30G024700 not classified & original description: pacid=50608167... 0.03 OrthoFinder output from all 47 species
Dac_g18424 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g43242 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g05644 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g06464 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g07152 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g21230 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g23388 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g26854 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g37178 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g40896 DOT4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g49048 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g50128 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g03480 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g03997 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g09654 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g10498 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g13628 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g15722 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g16100 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g16421 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g18184 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g21320 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g22176 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g22330 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g23579 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g23809 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g23994 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g24540 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g26403 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g30703 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g36355 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g41966 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g46744 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g47805 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g47826 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01008721001 No alias Pentatricopeptide repeat-containing protein At5g40410,... 0.03 OrthoFinder output from all 47 species
GSVIVT01030836001 No alias Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
LOC_Os03g43420.1 OSB1, LOC_Os03g43420 ssDNA-binding protein (OSB) 0.02 OrthoFinder output from all 47 species
LOC_Os05g24150.1 LOC_Os05g24150 Pentatricopeptide repeat-containing protein At2g34400... 0.02 OrthoFinder output from all 47 species
LOC_Os05g38190.2 LOC_Os05g38190 Pentatricopeptide repeat-containing protein At2g27610... 0.02 OrthoFinder output from all 47 species
Len_g04349 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g04791 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g05443 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g07899 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g12661 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g17785 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g18561 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18591 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Len_g18876 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g26145 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Len_g45180 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g54500 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g14103 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g38041 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10338179g0010 OTP84 Pentatricopeptide repeat-containing protein At3g57430,... 0.03 OrthoFinder output from all 47 species
MA_597g0020 DOT4 Pentatricopeptide repeat-containing protein At4g02750... 0.02 OrthoFinder output from all 47 species
Msp_g14691 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g15576 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g28021 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g40942 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g45671 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g45902 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g05322 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g06654 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g10444 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g19764 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g27636 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g29103 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13338 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g63870 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g02465 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g04533 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g19854 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g07618 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g30405 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g43260 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g56822 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g57552 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g60900 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0100.g019665 No alias not classified & original description: CDS=1-372 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0243.g026662 No alias not classified & original description: CDS=264-2522 0.03 OrthoFinder output from all 47 species
Sam_g21944 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g28003 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g36592 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g50176 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo442088 CRR22 Pentatricopeptide repeat-containing protein At2g33760... 0.02 OrthoFinder output from all 47 species
Spa_g14170 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g14336 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g14561 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g21770 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g05519 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06539 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g06875 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g16987 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g19505 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g19787 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g19923 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g20369 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g22908 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g23009 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g24828 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g26892 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g26899 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g26902 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g29860 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g41078 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 418 440
IPR002885 Pentatricopeptide_repeat 519 538
IPR002885 Pentatricopeptide_repeat 213 239
IPR002885 Pentatricopeptide_repeat 143 169
IPR002885 Pentatricopeptide_repeat 115 135
IPR002885 Pentatricopeptide_repeat 242 288
IPR002885 Pentatricopeptide_repeat 343 390
IPR002885 Pentatricopeptide_repeat 443 490
IPR002885 Pentatricopeptide_repeat 39 86
IPR002885 Pentatricopeptide_repeat 544 586
No external refs found!