Lfl_g09889

Description : pre-mRNA splicing factor *(SF1) & original description: none

Gene families : OG0000568 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000568_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Lfl_g09889
Cluster	HCCA: Cluster_77

Target	Alias	Description	ECC score	Gene Family Method
Aop_g18171	No alias	pre-mRNA splicing factor *(SF1) & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g60982	No alias	pre-mRNA splicing factor *(SF1) & original description: none	0.02	OrthoFinder output from all 47 species
Spa_g01640	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g08801	No alias	pre-mRNA splicing factor *(SF1) & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g07779	No alias	pre-mRNA splicing factor *(SF1) & original description: none	0.02	OrthoFinder output from all 47 species
Tin_g45333	No alias	pre-mRNA splicing factor *(SF1) & original description: none	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0016192	vesicle-mediated transport	IEP	HCCA
BP	GO:0048193	Golgi vesicle transport	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000504	RRM_dom	723	790
IPR032570	SF1-HH	350	464
IPR004088	KH_dom_type_1	483	533

External Links

No external refs found!