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  5. Aop_g12757

Aop_g12757


Description : solute transporter *(AAAP) & original description: none


Gene families : OG0000562 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000562_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g12757
Cluster HCCA: Cluster_284

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00255390 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.APC... 0.02 OrthoFinder output from all 47 species
AMTR_s00007p00201200 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.APC... 0.03 OrthoFinder output from all 47 species
AMTR_s00065p00046930 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.APC... 0.03 OrthoFinder output from all 47 species
Adi_g024581 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0001.g001001 No alias solute transporter *(AAAP) & original description: CDS=1-1422 0.04 OrthoFinder output from all 47 species
Ceric.12G054700.1 Ceric.12G054700 solute transporter *(AAAP) & original description:... 0.02 OrthoFinder output from all 47 species
Gb_00075 No alias solute transporter (AAAP) 0.03 OrthoFinder output from all 47 species
Gb_40430 No alias solute transporter (AAAP) 0.03 OrthoFinder output from all 47 species
Pir_g43474 No alias solute transporter *(AAAP) & original description: none 0.04 OrthoFinder output from all 47 species
Solyc05g052300.4.1 Solyc05g052300 solute transporter (AAAP) 0.02 OrthoFinder output from all 47 species
Zm00001e036819_P002 Zm00001e036819 solute transporter (AAAP) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEP HCCA
MF GO:0003678 DNA helicase activity IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0015267 channel activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0030983 mismatched DNA binding IEP HCCA
BP GO:0032200 telomere organization IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR013057 AA_transpt_TM 71 476
No external refs found!