1. Home
  2. Species
  3. Amblovenatum opulentum
  4. Sequence
  5. Aop_g12532

Aop_g12532


Description : component *(bL19c) of large plastid ribosomal-subunit proteome & original description: none


Gene families : OG0002345 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002345_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g12532
Cluster HCCA: Cluster_36

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00210720 evm_27.TU.AmTr_v1... Protein biosynthesis.organelle translation... 0.03 OrthoFinder output from all 47 species
AT4G17560 No alias Ribosomal protein L19 family protein 0.04 OrthoFinder output from all 47 species
AT5G47190 No alias Ribosomal protein L19 family protein 0.03 OrthoFinder output from all 47 species
Aev_g45795 No alias component *(bL19c) of large plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Aob_g08190 No alias component *(bL19c) of large plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Azfi_s0078.g038191 No alias component *(bL19c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Ceric.24G049700.1 Ceric.24G049700 component *(bL19c) of large plastid ribosomal-subunit... 0.08 OrthoFinder output from all 47 species
Cre17.g734450 No alias 50S ribosomal protein L19, chloroplastic OS=Mesostigma viride 0.09 OrthoFinder output from all 47 species
Dac_g03571 No alias component *(bL19c) of large plastid ribosomal-subunit... 0.14 OrthoFinder output from all 47 species
Dcu_g09086 No alias component *(bL19c) of large plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Dde_g00499 No alias component *(bL19c) of large plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Ehy_g05444 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g06479 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g13874 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01002112001 No alias Protein biosynthesis.organelle translation... 0.09 OrthoFinder output from all 47 species
Gb_05695 No alias component psRPL19 of large ribosomal subunit proteome 0.08 OrthoFinder output from all 47 species
LOC_Os02g11030.1 LOC_Os02g11030 component mtRPL19 of large ribosomal subunit proteome 0.02 OrthoFinder output from all 47 species
LOC_Os02g43600.1 LOC_Os02g43600 component psRPL19 of large ribosomal subunit proteome 0.05 OrthoFinder output from all 47 species
Len_g08100 No alias component *(bL19c) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Lfl_g33279 No alias component *(bL19c) of large plastid ribosomal-subunit... 0.06 OrthoFinder output from all 47 species
MA_947876g0010 No alias 50S ribosomal protein L19-1, chloroplastic... 0.09 OrthoFinder output from all 47 species
Mp3g02740.1 No alias component mtRPL19 of large ribosomal subunit proteome.... 0.1 OrthoFinder output from all 47 species
Msp_g09265 No alias component *(bL19c) of large plastid ribosomal-subunit... 0.09 OrthoFinder output from all 47 species
Nbi_g00593 No alias component *(bL19c) of large plastid ribosomal-subunit... 0.06 OrthoFinder output from all 47 species
Ore_g04060 No alias component *(bL19c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Pir_g02445 No alias component *(bL19c) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0043.g012817 No alias not classified & original description: CDS=1-963 0.06 OrthoFinder output from all 47 species
Sam_g17563 No alias component *(bL19c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Solyc08g078010.3.1 Solyc08g078010 component psRPL19 of large ribosomal subunit proteome 0.09 OrthoFinder output from all 47 species
Spa_g04552 No alias component *(bL19c) of large plastid ribosomal-subunit... 0.08 OrthoFinder output from all 47 species
Tin_g01651 No alias component *(bL19c) of large plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Zm00001e015296_P001 Zm00001e015296 component psRPL19 of large ribosomal subunit proteome 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR001857 Ribosomal_L19 133 226
No external refs found!