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  5. Aop_g12487

Aop_g12487


Description : not classified & original description: none


Gene families : OG0001091 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001091_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g12487
Cluster HCCA: Cluster_51

Target Alias Description ECC score Gene Family Method Actions
Adi_g013350 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g07628 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene57831.t1 Aspi01Gene57831 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0006.g010516 No alias not classified & original description: CDS=208-792 0.03 OrthoFinder output from all 47 species
Azfi_s0017.g014456 No alias not classified & original description: CDS=94-1260 0.04 OrthoFinder output from all 47 species
Cba_g11261 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g11262 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g13299 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.09G076700.1 Ceric.09G076700 not classified & original description: pacid=50587974... 0.03 OrthoFinder output from all 47 species
Ceric.33G015000.1 Ceric.33G015000 not classified & original description: pacid=50607719... 0.03 OrthoFinder output from all 47 species
Dde_g07370 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g03749 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g12806 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g17438 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g46825 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g01768 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g06140 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g10154 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g17964 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g13275 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g62197 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0076.g017498 No alias not classified & original description: CDS=1-1059 0.07 OrthoFinder output from all 47 species
Sacu_v1.1_s0163.g024012 No alias not classified & original description: CDS=52-1167 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s2982.g028544 No alias not classified & original description: CDS=1-792 0.05 OrthoFinder output from all 47 species
Sam_g08643 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g14698 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g23607 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g12664 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g15538 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g15539 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g18833 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g55199 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g01618 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0005546 phosphatidylinositol-4,5-bisphosphate binding IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0006887 exocytosis IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0030983 mismatched DNA binding IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0046903 secretion IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
BP GO:0140352 export from cell IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
MF GO:1901981 phosphatidylinositol phosphate binding IEP HCCA
MF GO:1902936 phosphatidylinositol bisphosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR002347 SDR_fam 73 279
No external refs found!