1. Home
  2. Species
  3. Amblovenatum opulentum
  4. Sequence
  5. Aop_g12446

Aop_g12446 (ATSRL1)


Aliases : ATSRL1

Description : not classified & original description: none


Gene families : OG0003543 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003543_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g12446

Target Alias Description ECC score Gene Family Method Actions
AT5G37370 ATSRL1 PRP38 family protein 0.02 OrthoFinder output from all 47 species
Adi_g060960 ATSRL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g27184 ATSRL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g32915 ATSRL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g04762 ATSRL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g03039 ATSRL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc04g014560.4.1 ATSRL1, Solyc04g014560 Pre-mRNA splicing factor SR-like 1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003916 DNA topoisomerase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005694 chromosome IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006265 DNA topological change IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
InterPro domains Description Start Stop
IPR024767 PRP38_C 194 270
IPR005037 PRP38 14 164
No external refs found!