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  5. Aop_g12441

Aop_g12441


Description : PLATZ-type transcription factor & original description: none


Gene families : OG0000228 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000228_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g12441
Cluster HCCA: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00008p00208550 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.PLATZ... 0.03 OrthoFinder output from all 47 species
AMTR_s00033p00166000 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.PLATZ... 0.02 OrthoFinder output from all 47 species
AT2G12646 No alias PLATZ transcription factor family protein 0.03 OrthoFinder output from all 47 species
AT3G60670 No alias PLATZ transcription factor family protein 0.03 OrthoFinder output from all 47 species
Aev_g47406 No alias PLATZ-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g21703 No alias PLATZ-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g11638 No alias PLATZ-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Als_g28131 No alias PLATZ-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g46803 No alias PLATZ-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene44972.t1 Aspi01Gene44972 PLATZ-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01001279001 No alias RNA biosynthesis.transcriptional activation.PLATZ... 0.03 OrthoFinder output from all 47 species
GSVIVT01012869001 No alias RNA biosynthesis.transcriptional activation.PLATZ... 0.02 OrthoFinder output from all 47 species
Gb_32018 No alias transcription factor (PLATZ) 0.02 OrthoFinder output from all 47 species
LOC_Os02g07650.1 LOC_Os02g07650 transcription factor (PLATZ) 0.02 OrthoFinder output from all 47 species
LOC_Os02g09070.1 LOC_Os02g09070 transcription factor (PLATZ) 0.04 OrthoFinder output from all 47 species
LOC_Os04g50120.1 LOC_Os04g50120 transcription factor (PLATZ) 0.02 OrthoFinder output from all 47 species
MA_10310g0010 No alias transcription factor (PLATZ) 0.02 OrthoFinder output from all 47 species
Msp_g29241 No alias PLATZ-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g24269 No alias PLATZ-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g08208 No alias PLATZ-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g20268 No alias PLATZ-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g63607 No alias PLATZ-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0194.g025441 No alias not classified & original description: CDS=1-1005 0.03 OrthoFinder output from all 47 species
Zm00001e002426_P001 Zm00001e002426 transcription factor (PLATZ) 0.02 OrthoFinder output from all 47 species
Zm00001e013748_P001 Zm00001e013748 transcription factor (PLATZ) 0.03 OrthoFinder output from all 47 species
Zm00001e013865_P001 Zm00001e013865 transcription factor (PLATZ) 0.03 OrthoFinder output from all 47 species
Zm00001e023272_P001 Zm00001e023272 transcription factor (PLATZ) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
InterPro domains Description Start Stop
IPR006734 PLATZ 79 150
No external refs found!